Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2042 |
Symbol | |
ID | 1042872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2321449 |
End bp | 2323305 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637145456 |
Product | hypothetical protein |
Protein accession | NP_744192 |
Protein GI | 26988767 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGGCAT CTCGTATTTC CGGTCGCTCG GGACCGTTGT CGGTACTTGC CTCATCAGTA CTTTTTTCTG CGTCTGCCGG TGCCGCTCAG TTTCACTGGG GTGAACTTGA GGGGCAATTC GACTCGGCGC TTTCCTTTGG TAGCAGCATT GCGACTGCCA ACCCTGACCC GGCCCTGCAC AACAGCGCCA ACAGCGATGA CGGCCGCCTG AACTTTGCCT CTGGCGATGT GTTTTCAGCG GTGTTCAAAG GCACCCATGA CCTGGAGCTC AAGCACGACA ACCTGGGGGT GTTCCTGCGC GGTACCTACT GGTACGACAC GGCCCTGCGT GATCACGATC AGCGCTTCAA GCAGGTCGAG GACAACAACC GCAAGCGCTC AGCCAAGACC GCAGGTAGCC AGCTGCTCGA TGCCTTCGGT TACTACCTGT ACGACATCGA CGGCCAACCG GGTTCGCTCA GGCTGGGCAA GCAGGTGGTC AACTGGGGTG AGAGCACCTT CATCCAGGGC GGACTGAACG TCATCAACCC CTTCAACCTG GCGGCCTTGC GCCGCCCCGG CTCGGAAGTG AAGGACGCGC TGGTGCCGGT GAACCTGTTC TACTTCACCC AGAACCTCAC CGAAGCGCTG TCGGTCGACG GTTTCTATCA GCTGGACTGG GAACAGACCC AGCTCGACAA CTGTGGCACG TTCTTTTCGA ACAACGACTT TTTGCCCGAT GGGTGCGATG GCCTCGACGT GGGCGCCAAA TTGCTCGGCA ACCCCACAGC CGTGGCGGGG CTTGCGCCGT TCGGTGTGAA CCTCACCAGC GAAGGCGTGC GCATACCTCG CGGCAGCGAC CAGGATGCCC GCAACAGCGG GCAGTGGGGC GTTTCGCTGC GCTGGTACGT GGCGGCGCTG GACACCGAGT TTGGCGCTTA CGCGGCGAAC TACCACAGCC GCACGCCTTA CCTGGGTACG GTCAGCAGCC CGTATTTCGA CAACCGCCGT TTCGCCCCGC AGTTGTGCGC CAACCTCGCT ATCGGGCTTG CAGACTGTGC CGCTTTTCTG GGTTCCAGCG CAGGCCAGTC GCTGGTCGGC GCGCTACGCC TGGGCACCTC GCAGTACCGG GTGCAATACC CCGAGGACAT TCGCCTCTAC GGCCTTTCGT TCTCCACCAC CCTGCGCACC GGCACGGCGC TGCAGGGGGA GCTGAGCTAC CGGCCGAACA TGCCCATGCA GCTCAACGGT ACCGATATCA TCCAGTCGTT GTTGAACGTC GATGGCCGCT CGCCCTTGCT GGGTGACGGC CTGCGGCCAG ACAGCGCCAG TACGCTGTTC GACGGCTACC GCCGTAAAGA GATGACCCAG TTGCAGATAA CCGCTGTTCA CGCTTTCAGC CAGGTGATGG GGGCCAACCA GTTGCTGTTG ATAGGCGAGG CTGGCGCCAC CTACGTGGGC GGTCTGGAGG GCGCCTATGG CCCCCGTTAC GGGCGCTCGG GCACGTTCAA CAGCGGCGAA CTGGCGGACA ACAGCGTGTG CGTGGCCATT TCCAAAACCC CTGAGCATTG CAACGACGAA GGCTTCATGA CCCCGTTTTC CTGGGGCTAC CGGCTGCGTG CCACCTGGGC CTACCCCAAC GTGATTGCCG GTTTCGACCT GCGGCCGAAC CTGTCCTGGG CACATGACGT GCACGGCACC GGCCCGGTGG AGGGGTCGGC GTTCAGCGAA GGCTCCAGGG CCATCAGTGT CGGGTTGGAT GCGACGCTCG CCAGCACCTA CAGCCTGAGT GTGTCGTACA CCGACTTTAT CGACGGCGAC TATGGCACCC GCGGCGACCG GGACTTCATC TCGCTGAGCC TGGGCGTCAC TTTCTGA
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Protein sequence | MMASRISGRS GPLSVLASSV LFSASAGAAQ FHWGELEGQF DSALSFGSSI ATANPDPALH NSANSDDGRL NFASGDVFSA VFKGTHDLEL KHDNLGVFLR GTYWYDTALR DHDQRFKQVE DNNRKRSAKT AGSQLLDAFG YYLYDIDGQP GSLRLGKQVV NWGESTFIQG GLNVINPFNL AALRRPGSEV KDALVPVNLF YFTQNLTEAL SVDGFYQLDW EQTQLDNCGT FFSNNDFLPD GCDGLDVGAK LLGNPTAVAG LAPFGVNLTS EGVRIPRGSD QDARNSGQWG VSLRWYVAAL DTEFGAYAAN YHSRTPYLGT VSSPYFDNRR FAPQLCANLA IGLADCAAFL GSSAGQSLVG ALRLGTSQYR VQYPEDIRLY GLSFSTTLRT GTALQGELSY RPNMPMQLNG TDIIQSLLNV DGRSPLLGDG LRPDSASTLF DGYRRKEMTQ LQITAVHAFS QVMGANQLLL IGEAGATYVG GLEGAYGPRY GRSGTFNSGE LADNSVCVAI SKTPEHCNDE GFMTPFSWGY RLRATWAYPN VIAGFDLRPN LSWAHDVHGT GPVEGSAFSE GSRAISVGLD ATLASTYSLS VSYTDFIDGD YGTRGDRDFI SLSLGVTF
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