Gene PP_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2042 
Symbol 
ID1042872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2321449 
End bp2323305 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content63% 
IMG OID637145456 
Producthypothetical protein 
Protein accessionNP_744192 
Protein GI26988767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGGCAT CTCGTATTTC CGGTCGCTCG GGACCGTTGT CGGTACTTGC CTCATCAGTA 
CTTTTTTCTG CGTCTGCCGG TGCCGCTCAG TTTCACTGGG GTGAACTTGA GGGGCAATTC
GACTCGGCGC TTTCCTTTGG TAGCAGCATT GCGACTGCCA ACCCTGACCC GGCCCTGCAC
AACAGCGCCA ACAGCGATGA CGGCCGCCTG AACTTTGCCT CTGGCGATGT GTTTTCAGCG
GTGTTCAAAG GCACCCATGA CCTGGAGCTC AAGCACGACA ACCTGGGGGT GTTCCTGCGC
GGTACCTACT GGTACGACAC GGCCCTGCGT GATCACGATC AGCGCTTCAA GCAGGTCGAG
GACAACAACC GCAAGCGCTC AGCCAAGACC GCAGGTAGCC AGCTGCTCGA TGCCTTCGGT
TACTACCTGT ACGACATCGA CGGCCAACCG GGTTCGCTCA GGCTGGGCAA GCAGGTGGTC
AACTGGGGTG AGAGCACCTT CATCCAGGGC GGACTGAACG TCATCAACCC CTTCAACCTG
GCGGCCTTGC GCCGCCCCGG CTCGGAAGTG AAGGACGCGC TGGTGCCGGT GAACCTGTTC
TACTTCACCC AGAACCTCAC CGAAGCGCTG TCGGTCGACG GTTTCTATCA GCTGGACTGG
GAACAGACCC AGCTCGACAA CTGTGGCACG TTCTTTTCGA ACAACGACTT TTTGCCCGAT
GGGTGCGATG GCCTCGACGT GGGCGCCAAA TTGCTCGGCA ACCCCACAGC CGTGGCGGGG
CTTGCGCCGT TCGGTGTGAA CCTCACCAGC GAAGGCGTGC GCATACCTCG CGGCAGCGAC
CAGGATGCCC GCAACAGCGG GCAGTGGGGC GTTTCGCTGC GCTGGTACGT GGCGGCGCTG
GACACCGAGT TTGGCGCTTA CGCGGCGAAC TACCACAGCC GCACGCCTTA CCTGGGTACG
GTCAGCAGCC CGTATTTCGA CAACCGCCGT TTCGCCCCGC AGTTGTGCGC CAACCTCGCT
ATCGGGCTTG CAGACTGTGC CGCTTTTCTG GGTTCCAGCG CAGGCCAGTC GCTGGTCGGC
GCGCTACGCC TGGGCACCTC GCAGTACCGG GTGCAATACC CCGAGGACAT TCGCCTCTAC
GGCCTTTCGT TCTCCACCAC CCTGCGCACC GGCACGGCGC TGCAGGGGGA GCTGAGCTAC
CGGCCGAACA TGCCCATGCA GCTCAACGGT ACCGATATCA TCCAGTCGTT GTTGAACGTC
GATGGCCGCT CGCCCTTGCT GGGTGACGGC CTGCGGCCAG ACAGCGCCAG TACGCTGTTC
GACGGCTACC GCCGTAAAGA GATGACCCAG TTGCAGATAA CCGCTGTTCA CGCTTTCAGC
CAGGTGATGG GGGCCAACCA GTTGCTGTTG ATAGGCGAGG CTGGCGCCAC CTACGTGGGC
GGTCTGGAGG GCGCCTATGG CCCCCGTTAC GGGCGCTCGG GCACGTTCAA CAGCGGCGAA
CTGGCGGACA ACAGCGTGTG CGTGGCCATT TCCAAAACCC CTGAGCATTG CAACGACGAA
GGCTTCATGA CCCCGTTTTC CTGGGGCTAC CGGCTGCGTG CCACCTGGGC CTACCCCAAC
GTGATTGCCG GTTTCGACCT GCGGCCGAAC CTGTCCTGGG CACATGACGT GCACGGCACC
GGCCCGGTGG AGGGGTCGGC GTTCAGCGAA GGCTCCAGGG CCATCAGTGT CGGGTTGGAT
GCGACGCTCG CCAGCACCTA CAGCCTGAGT GTGTCGTACA CCGACTTTAT CGACGGCGAC
TATGGCACCC GCGGCGACCG GGACTTCATC TCGCTGAGCC TGGGCGTCAC TTTCTGA
 
Protein sequence
MMASRISGRS GPLSVLASSV LFSASAGAAQ FHWGELEGQF DSALSFGSSI ATANPDPALH 
NSANSDDGRL NFASGDVFSA VFKGTHDLEL KHDNLGVFLR GTYWYDTALR DHDQRFKQVE
DNNRKRSAKT AGSQLLDAFG YYLYDIDGQP GSLRLGKQVV NWGESTFIQG GLNVINPFNL
AALRRPGSEV KDALVPVNLF YFTQNLTEAL SVDGFYQLDW EQTQLDNCGT FFSNNDFLPD
GCDGLDVGAK LLGNPTAVAG LAPFGVNLTS EGVRIPRGSD QDARNSGQWG VSLRWYVAAL
DTEFGAYAAN YHSRTPYLGT VSSPYFDNRR FAPQLCANLA IGLADCAAFL GSSAGQSLVG
ALRLGTSQYR VQYPEDIRLY GLSFSTTLRT GTALQGELSY RPNMPMQLNG TDIIQSLLNV
DGRSPLLGDG LRPDSASTLF DGYRRKEMTQ LQITAVHAFS QVMGANQLLL IGEAGATYVG
GLEGAYGPRY GRSGTFNSGE LADNSVCVAI SKTPEHCNDE GFMTPFSWGY RLRATWAYPN
VIAGFDLRPN LSWAHDVHGT GPVEGSAFSE GSRAISVGLD ATLASTYSLS VSYTDFIDGD
YGTRGDRDFI SLSLGVTF