| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2034 |
|---|
| Symbol | |
|---|
| ID | 1042882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2311593 |
|---|
| End bp | 2312852 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637145448 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | NP_744184 |
|---|
| Protein GI | 26988759 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.836232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCGTGCG CCAGGGGCGC ACGCTGTTCA ACAGGTATCG ACATGCCCCA CGCTGGCCCC
AAGCTGCTGA CCCAAATTGC TGCCGTGCAC TTCGTCAGCC ATGTGCACAT CATGCTGATC
CCGGCGCTAC TGCCCGTGCT GCCCGGCCTG CTGGGCGTAG GCTTCGTAGA GCTGGGCGTA
GCCCTGGCGG TGTTCAACAT CGTCTCCGCG CTGGTACAGG CCCCGCTGGG TTATGCCGTC
GACCACTATG GCGCACGTAA AGTGCTCAAG GCCGGGCTGT TGCTGGGCAG CCTCAGTTTC
GTGCTACTGG CGGCCAGCCC CGGGTATGCG GTATTGCTGG TGGCGATGGC CATGGCTGGC
CTGGCCAATG GTGTGTACCA CCCGGCCGAC TATGCGCTGC TGGCCAACGG CATCGAGCCC
GCACGCCTGG GGCGGTCGTT CTCTATACAT ACCTTTGCCG GTTTCCTCGG TTCGGCCGTT
ACCCCAGCCG TATTTCTCGG CATCGCCGCG GCGCTCGGCA CGCGGGCAGC CCTGGCGGCG
GGCGCCGTAT TCGGGGTAGC CGCGCTACTG CTGATATCGA TACCAGGCAG TGGCGTTTAC
CGGGTCGCCA GGCCTGCCAA CAAACAAGAT ACAGGCCCGA CCGCAGCAAC AGGCCGCGTA
CGTTTGTTCA CCCCCATGAT CGGCGTGCTG ACGGTGCTGT TCATCCTGCT CAACCTGAGC
ACCAGTGCCA TCGAGAAGTT CTCCGTAGCC GCCCTGGTCC AGGGCCAAGG CCTGACACTG
GCCTGGGCCA ACGCCGCGCT CACCGCTTTC CTGCTGAGCA GCGCAGCCGG CGTGCTGTGC
GGAGGCGCTT TGGCCGACCG TACCCGGCGC CATGGCCTGG TGGCGGCACT GGCCTTCGCG
CTGGCGGCTG CGCTGACTGC ACTGGTGGCG CTGGGGCTGC TGCAGGGCTG GGCATTGGTG
GTCGTACTGG GTGCCATCGG CTTGCTCACC GGGGTCATCG CCCCATCACG GGACATGCTG
GTCAAGGCGG CAGCGCCACC CGGGGCCGAG GGCAAAACCT TCGGCCTGGT GTCGACCGGG
TTCAACGTCG GCGGTGCCAT CGGGCCGGTG GCGTTCGGCT GGATGCTCGA TCAGCGCCTG
CCCAACGGGA TTTTCGTCGC ATCGGTGGTG TTCATGCTGC TGACGGTGCT GCTGACCCTG
GCACAGGAGA TGTATTCAGC CAGAAGGCGC GCGACTGAAC AGCTGGCGCG CGCCCTGTAG
|
|---|
| Protein sequence | MPCARGARCS TGIDMPHAGP KLLTQIAAVH FVSHVHIMLI PALLPVLPGL LGVGFVELGV
ALAVFNIVSA LVQAPLGYAV DHYGARKVLK AGLLLGSLSF VLLAASPGYA VLLVAMAMAG
LANGVYHPAD YALLANGIEP ARLGRSFSIH TFAGFLGSAV TPAVFLGIAA ALGTRAALAA
GAVFGVAALL LISIPGSGVY RVARPANKQD TGPTAATGRV RLFTPMIGVL TVLFILLNLS
TSAIEKFSVA ALVQGQGLTL AWANAALTAF LLSSAAGVLC GGALADRTRR HGLVAALAFA
LAAALTALVA LGLLQGWALV VVLGAIGLLT GVIAPSRDML VKAAAPPGAE GKTFGLVSTG
FNVGGAIGPV AFGWMLDQRL PNGIFVASVV FMLLTVLLTL AQEMYSARRR ATEQLARAL
|
|---|
| |