Gene PP_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1999 
Symbol 
ID1043017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2267073 
End bp2267630 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content59% 
IMG OID637145409 
Productcolicin V production protein 
Protein accessionNP_744149 
Protein GI26988724 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.148494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCATTTA CCTTGGTTGA TTGGGCGATC ATCGCGATCA TCGCCGTCTC CACACTGATC 
AGTCTCAAGC GCGGCTTCGT CAAGGAGGCC TTGTCCTTGC TCATCTGGAT CATTGCCGGT
GCGGTTGCCT GGATGTTCGG CGGTTCGCTC TCGGTGTATC TTGAGAGCTA TATCCAGACG
CCATCGATGC GCATCATCGC TGGCTGCGCC ATTCTTTTCG TCGCCACCTT GCTGGTGGGG
GCCATGGTCA ACTTCCTTGT CGGTGAGCTG ATCCGCGTGA CCGGGCTGTC CGGCACCGAT
CGTTTCCTGG GCATGGCCTT TGGCGCTGCG CGCGGGGCCT TGCTGGTAGT GGTGGCCATA
GGCCTGATCA GCCTGGGGCC GGTTCAACAA GACACCTGGT GGCAGGAATC ACGCCTGATA
CCACAATTTC TCTTGGTCGC CGACTGGTCG AAAAACCTGA TTCTGGGTTT CACCGACCAA
TGGACGCCCA GTGGGCTGAT CAGCACTCCG GCTGATCTTC CGTTCAAGGA ACAGTTGCTC
GGGCCGTCCA AGCCCTGA
 
Protein sequence
MAFTLVDWAI IAIIAVSTLI SLKRGFVKEA LSLLIWIIAG AVAWMFGGSL SVYLESYIQT 
PSMRIIAGCA ILFVATLLVG AMVNFLVGEL IRVTGLSGTD RFLGMAFGAA RGALLVVVAI
GLISLGPVQQ DTWWQESRLI PQFLLVADWS KNLILGFTDQ WTPSGLISTP ADLPFKEQLL
GPSKP