Gene PP_1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1995 
SymboltrpF 
ID1043024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand+ 
Start bp2263205 
End bp2263825 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content64% 
IMG OID637145405 
ProductN-(5'-phosphoribosyl)anthranilate isomerase 
Protein accessionNP_744145 
Protein GI26988720 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.670825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.0884325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATG TTCGCAGCAA GATCTGCGGG ATTACCCGCA TCGAAGACGC ACTGGCCGCT 
GCCGAAGCGG GGGCCGATGC CATCGGCTTC GTCTTCTATG CCAAGAGCCC GCGGGCGGTG 
GACGTGCGCC AGGCGCGGGC GATCATTGCC GAGTTGCCGC CCTTCGTGAC CACGGTCGGG 
CTGTTCGTCA ATGCCTCGCG CTGCGAGCTG AACGAGATCC TCGAAGTGGT CCCGCTGGAC 
CTGCTACAGT TTCACGGCGA TGAAACCCCG CAGGACTGTG AAGGCTACCA CCGCCCCTGG 
ATCAAGGCCC TGCGTGTGCG CCCTGGCGAT GACCTGGAGG CGGCCTGTCG GCTTTACGCG 
GGTGCCCGCG GCATTTTGCT CGACACCTAT GTACCGGGCG TGCCAGGGGG AACCGGCGAG 
GCGTTCGACT GGTCATTGGT ACCGGCGCGT CTTGGCAAGC CGATCATCCT TGCGGGCGGG 
CTGTCGGCCG ATAACGTTGG CCAGGCCATT GCCCAGGTAA AGCCTTATGC GGTGGATGTC 
AGCGGTGGCG TGGAACAGGC CAAGGGCATC AAGGATGCGG CGAAGATCGA GGCCTTCATG 
CGTGCGGTGA AACAGGCTTG A
 
Protein sequence
MSNVRSKICG ITRIEDALAA AEAGADAIGF VFYAKSPRAV DVRQARAIIA ELPPFVTTVG 
LFVNASRCEL NEILEVVPLD LLQFHGDETP QDCEGYHRPW IKALRVRPGD DLEAACRLYA 
GARGILLDTY VPGVPGGTGE AFDWSLVPAR LGKPIILAGG LSADNVGQAI AQVKPYAVDV 
SGGVEQAKGI KDAAKIEAFM RAVKQA