| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1964 |
|---|
| Symbol | |
|---|
| ID | 1043074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2226595 |
|---|
| End bp | 2227398 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637145369 |
|---|
| Product | deoxynucleotide monophosphate kinase, putative |
|---|
| Protein accession | NP_744116 |
|---|
| Protein GI | 26988691 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.131636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000235815 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACCA TCATCGGCCT CGCCGCAGTA GCTCGATCCG GTAAAGACAC CGTCGCTTCC
ATGCTCATGG AGCACCCTGA GGTCGCGACA TATGCCCTAG CTGATCCGCT CAAAGCAGGT
TGCCAAGCAA TCTTTGGCTT GTCCGATGCC GAAGCGTGGT CTGACGAAGC GAAGGAAAAA
ACCATCGATC TGTGGGGGCT CTCGCCTCGC CAACTCTTTC AGCGGGCGGG AACGGAATGG
CTTAGAGATC ATAACGCAGA CCACTGGCTC CTGCGCGCCG ATCGCCAACT GAATCACAAA
CCTGTGGAAC CTCGCCCAGT CTCGGCAACA GAGCTTGCCT CCCCTTCCGC ATCGATCTGG
CTCGGCGTGC AAGCCTTCTG GGGATTAACT GAAGCCCAAA CTTGGCAAGA TGATCTCCGA
GCGGCAGAGG ACCCATTCTG GAACATCACC CCAAAGGAGA TGTTCGCAAT TGTTGATCGC
TATCTGTCGC GAGACTTTCC CTCTTACGTC AGCACTAGAA GCAAGCGTGC AATATCAACC
CCTACTCGCC CACTAACAAA TGCCGCTGGT AAAAGCATCT TCATTATTAA GGATATCAGA
TATGAAAACG AAGCGGCATT CTGGCGCAGC CATAATGGAG TAATTTGGCA TATCACTCGC
AACAATGCAA TAAAAGTACA ATCCCATTCT TCAGAAGATG GAATTGAGTT CCGCAACGGC
GATATTTCAA TTGAAAACAA TGATACAATT GAAGAACTAA GAAAAAAGGT TGAATCCGCT
TGGAGCTGCG TTCGCGTCGA TTAA
|
|---|
| Protein sequence | MPTIIGLAAV ARSGKDTVAS MLMEHPEVAT YALADPLKAG CQAIFGLSDA EAWSDEAKEK
TIDLWGLSPR QLFQRAGTEW LRDHNADHWL LRADRQLNHK PVEPRPVSAT ELASPSASIW
LGVQAFWGLT EAQTWQDDLR AAEDPFWNIT PKEMFAIVDR YLSRDFPSYV STRSKRAIST
PTRPLTNAAG KSIFIIKDIR YENEAAFWRS HNGVIWHITR NNAIKVQSHS SEDGIEFRNG
DISIENNDTI EELRKKVESA WSCVRVD
|
|---|
| |