Gene PP_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1952 
Symbol 
ID1043103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2208682 
End bp2209629 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content54% 
IMG OID637145357 
Productmetallo-beta-lactamase family protein 
Protein accessionNP_744104 
Protein GI26988679 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.59502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000046762 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTTAGAG AGGACAAAAA AATGAACGAG AACATGTCCA AAAACGGTCA GACTGCCATC 
ATCAATCCGG GCTGGTATCG GTTCAAATTA GGTAGCTTTG AGATCACGGT GGTCTCTGAT
GGGCCAATGC CACTGATTCC TCCATCTTCG GGATTTTCCG ATGCGCCGCC GGAGGACGTC
GAATCGCTGT TGTCCGAGAA CTTCCTGCCC ACTGACCGGC TGATGCTGGG GATGAATGCT
CTGGTCATCA ACACCGGTAC TCACCTCGTT CTGGTGGATA CAGGGATGGG GCAAAGCATG
GGAGAGCTGA GCCGATTATT CGGTCCTTCC ACTGGGCATT TGATGTCAAA CCTTGCCGCC
GCAGGGTTTT CTCCAAACGA TATCGATGTG GTAGCGATTA CCCATGCCCA TCCAGATCAC
TGCTGGGGGC TGGTCGATGA GGCTGGTGAA AAGGTCTTTC CCAAAGCTCG TGTCGCGATT
GCCGAAGAGG AGTTGATGTA CTGGCTGGAC ATCAGTAACC GCGATGTCTC GAAGTTCGCG
GAGTGGAGTG TCGATGGCGC GATCAAGAAC ATAACTCCAT ACCTTAAGGA AGCAATCTTG
GTGCGGGATG GGGGAGAAGT CGTTCCTGGT ATCACTGGCC TGCTCTGCCC TGGACATTCA
CCCGGCCATA GCGGCTATGT AATCAGCTCC GATGACACCG TATTGGTCAC CATCGGAGAC
CTGGCGCATC ACCACATCCT GGCGTTACGT CACCCGGAGT GGAAGATCAG CTATGACACT
GACTCTGACC TTTCCGTAAC GTCACGCCGA CGTATCCTGG ACTTCCTCGC CCAGAACCGC
TTGATGACCC ATGGCTACCA CTTTCCTTGG CCTGGCATAG GCCACGTCGC CAAGGAAGGT
GACGGCTATC GCTGGATCGC TTCGCCTTCT CATACCTATC TGATCTAA
 
Protein sequence
MVREDKKMNE NMSKNGQTAI INPGWYRFKL GSFEITVVSD GPMPLIPPSS GFSDAPPEDV 
ESLLSENFLP TDRLMLGMNA LVINTGTHLV LVDTGMGQSM GELSRLFGPS TGHLMSNLAA
AGFSPNDIDV VAITHAHPDH CWGLVDEAGE KVFPKARVAI AEEELMYWLD ISNRDVSKFA
EWSVDGAIKN ITPYLKEAIL VRDGGEVVPG ITGLLCPGHS PGHSGYVISS DDTVLVTIGD
LAHHHILALR HPEWKISYDT DSDLSVTSRR RILDFLAQNR LMTHGYHFPW PGIGHVAKEG
DGYRWIASPS HTYLI