| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1951 |
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| Symbol | |
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| ID | 1043107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2207786 |
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| End bp | 2208613 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637145356 |
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| Product | short chain dehydrogenase/reductase family oxidoreductase |
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| Protein accession | NP_744103 |
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| Protein GI | 26988678 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.194431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000447101 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACTGG ATACAGTTTT TTCAGTTGAA GGCGCTCGTG TCATTGTAAC GGGGGCGGCC
AGTGGATTAG GTCTAGCCTT CACTGAAGCG ATGGCTGAGA GTGGAGCACA GGTCGCAATG
CTTGACCTGA ATCGTGAAGC GCTCGATGCA CAGTTCAGAA GATTGAGAAG CCTTGGATAT
TCAGTCAGAT CCCACGTTTT GGATGTGACG GACCGAGATG CTGTAGATGA TACGTTTAAT
GCTGTAGCAG CAGGCTTTGG TGGATTGGAC ATTGTGTTCG CCAACGCCGG GATTGATCCA
GGACCTGGAT TCGCTGCACT CAATGCCGCA GGGGAACGAG AACCAGCAAA TATGCTGGAA
GAATACTCGG ACCATCGCTG GAGGAAGGTC ATCTCCGTCA GCCTAGATGC TGTGTTCTAT
TCGATAAGAG CTGCTGCGCG GCACATGAGA GCTAACCGAT CTGGCTCAAT TATTGTGACC
ACCTCGGTGT CGGCCCTTCG ACCTGCGGTC ACACTCGGCG CCGCCTATGC AGCAGCGAAG
GCCGGTGCAG CCCAATTAGT TCGGGCCACG GCCCTCGAAT TGGCCAGCGA TGGCGTCAGG
GTCAATGCAA TTGCTCCTGG GCCATTCGAA ACGGACATCG GCGGCGGCTT CATGCACAAC
TCGGAAGTGC GAGCCAAGAT GGCAGCAGGC GTTCCCATGG GGCGCATTGC TGAGGTCGAG
GAAATCAAGC CGCTCGCACT TTACCTCGCA TCCAAGGCTT CCAGTTTCGT CACCGGCCAA
CAGTTTGTAA TTGATGGCGG CCTTTCTTTG TCTGCGGCTC GTGCATAG
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| Protein sequence | MKLDTVFSVE GARVIVTGAA SGLGLAFTEA MAESGAQVAM LDLNREALDA QFRRLRSLGY
SVRSHVLDVT DRDAVDDTFN AVAAGFGGLD IVFANAGIDP GPGFAALNAA GEREPANMLE
EYSDHRWRKV ISVSLDAVFY SIRAAARHMR ANRSGSIIVT TSVSALRPAV TLGAAYAAAK
AGAAQLVRAT ALELASDGVR VNAIAPGPFE TDIGGGFMHN SEVRAKMAAG VPMGRIAEVE
EIKPLALYLA SKASSFVTGQ QFVIDGGLSL SAARA
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