Gene PP_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1878 
Symbol 
ID1043218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2101537 
End bp2102304 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content60% 
IMG OID637145281 
Producthypothetical protein 
Protein accessionNP_744033 
Protein GI26988608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.192229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACCAC TTCTGATCAC CCTGCTCATC GTGGCGGGCA TCGCGTTGCT GATCGTGATC 
GGCTACCTCA ACAATGTGGT CGAGAATGGC AAGCTTGAGC GCGCCCGGAT GAAGATCGAG
CTCGCCGACC GCCTGCGCCG CTGTGGCGAG ATCACCGAAA CGTTCCCCGG CCAGTTCATG
ACCCCGGCCC TCAAGTTGCT GCTGACCCGC CTGGAGCTGA ACCTCAACCA GCGCCTGCTG
GCGGTGGACA AGCACAATGC CGAATTCAAG GCGCGCATCG CCGAACTGGA AGGGCTGATT
GCCCTGGGCG ACAAGATCCC GGTCAACAAC CCACCCAACC CGATCCACAC CGAGATCAAG
GCCAAGGACG TACGCTTCTT GCTGGAGGCG CTGCACAATC AGGTGACCCG CGCTGCCCAT
GAGGGCTTCT TGCCCGCTGT CGAGGCCAAG CATTGGGTCA AGGAAATCCG CCATATCCTG
GTGCTGCTGC ATATAGAGTT CTTCAACAAC CTCGGCCAAC AGGCCCTGCA AAAAGGCCAG
CCCGGCCAGG CGCGCCTGGC CTTCGAGCGC GGCGTGCAGT ATTTGCGCAA GCAGCCGGAG
CCGAAGGTGT ATGAAGAGCA GCTGACGTAT CTTGAGAAAC TGTTGGCCCG GGCCAATGCC
CAGGTACTGG ACCGCATGGC CCCGGCAGAA GACGAGCACA ACGAATTGAC CGATGGGCTC
AAGACCGATG AGGAAGAAAC CTGGAAGAAG AAGGTGATCT ACGACTGA
 
Protein sequence
MTPLLITLLI VAGIALLIVI GYLNNVVENG KLERARMKIE LADRLRRCGE ITETFPGQFM 
TPALKLLLTR LELNLNQRLL AVDKHNAEFK ARIAELEGLI ALGDKIPVNN PPNPIHTEIK
AKDVRFLLEA LHNQVTRAAH EGFLPAVEAK HWVKEIRHIL VLLHIEFFNN LGQQALQKGQ
PGQARLAFER GVQYLRKQPE PKVYEEQLTY LEKLLARANA QVLDRMAPAE DEHNELTDGL
KTDEEETWKK KVIYD