| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1807 |
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| Symbol | kdsA-2 |
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| ID | 1043295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2031399 |
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| End bp | 2032241 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637145209 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | NP_743962 |
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| Protein GI | 26988537 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.838992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.179069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAAGA TCAACTCCAC AATCGAATGC TCCAACTCGG CTCCTTTTGT GCTATTCGGC
GGCATCAACG TGCTCGAGTC TGAAGACCTG GCCCTTACTG CCTGTGCAGA ATATGTGCGC
GTCACGCAGA AGCTGGGCAT CCCGTATGTG TTCAAAGCCA GCTTTGATAA AGCCAATCGC
TCATCGATCC ATTCCTACCG TGGCCCCGGC ATGGAAGAAG GGCTGCGGAT CTTTGAAAAG
GTGAAGGCAG AATTTGGCGT GCCGATAATC ACCGACGTTC ACGAAATCTA CCAAACGGCC
CCGGTGGCGG AAGTCGTCGA TGTGCTGCAG CTGCCGGCAT TCCTCGCCCG TCAAACAGAC
CTAGTTGTTG CCTTGGCCAA AACCGGCAAG CCGGTGAACA TCAAAAAGCC CCAATTCCTC
AGCCCTTCGC AGATGCAGAA CATCGTGCAT AAGTTCAAGG AAGCGGGTAA TGACCAGTTG
ATCCTTTGCG ACAGGGGCAC TTGCATGGGC TACGACAACC TGATCGTGGA CATGCTTGGC
TTCGGCGTCA TGAAGCGTAC TTGCCAAGAT CTGCCGATCA TCTTTGACGT CACTCATGCC
CTGCAGAATC GCGACCCATC GGGTGCGGCT TCTGGCGGTC GGCGCGAGCA GGTGGTAGAG
CTGGCACGTG CCGGCATGGG AGTCGGATTG GCTGGCCTGT TCCTGGAAGC CCACCCAAAC
CCTGATCAGG CCAAGTGTGA TGGCCCGAGC GCACTGCCAT TGGACAAGCT GGAACCCTTC
CTGGCACAAA TCAAAGCGCT GGATGATCTG GTAAAATCAT TCCCGCAATT GACTATTGCC
TAA
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| Protein sequence | MIKINSTIEC SNSAPFVLFG GINVLESEDL ALTACAEYVR VTQKLGIPYV FKASFDKANR
SSIHSYRGPG MEEGLRIFEK VKAEFGVPII TDVHEIYQTA PVAEVVDVLQ LPAFLARQTD
LVVALAKTGK PVNIKKPQFL SPSQMQNIVH KFKEAGNDQL ILCDRGTCMG YDNLIVDMLG
FGVMKRTCQD LPIIFDVTHA LQNRDPSGAA SGGRREQVVE LARAGMGVGL AGLFLEAHPN
PDQAKCDGPS ALPLDKLEPF LAQIKALDDL VKSFPQLTIA
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