Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1788 |
Symbol | |
ID | 1043316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2004657 |
End bp | 2005736 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637145191 |
Product | hypothetical protein |
Protein accession | NP_743944 |
Protein GI | 26988519 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0856032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00693374 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTATTG GCCCCTCGCA CGTAGTACGC TGGAAAAGGC TGAGAGATTT TTTTGAAATC GATAGTGAGT TTCATGGGGT CGGTGGGCTC CCGATATGGC ATGAGAGCAT CAAGAGCTGT TCAAGAACAA ATAATCCATT CATCATGGTA GGTGACTTTA GATTCGGCAA CACTTATCAT CTGACACATA ATGAGAACGA CGCCTTCATT GTAAAGAAAG AATTTATAAA CCCAGAAATA GACAAGCTTA TGTATGATAA GTCTATTGAA AGCTTAGAAA TCCTTCAAAG AGATGATATA AGACTAGTTT TCTGGTGCCT ATTGATCAGA GAATACAAAA ACATCAACGA GGATAAATAT TTCAAGAACA GCACATACCA ACATCCCATT TGGAATCTAC CCGCAATTGA AAGCAGATTC AGAAACAGCA TAAAACTTTC TGACATACTT AATTACGATC TTAACTTCTT GTTTATTGAC TCAAGTAATC ATCCTTCAAT TTTTGGTTAT TACTTCCTCA AAAAAATCCA CGAAGGGTTG CCTTCCCCGC AAGCACTAAC GTTGGCTCTG AAGGCAAAAA AATCGTTTTT TAAAATATTT GATTATTTCA AAAACGACAG CTTTGTCGTA TCGGGAACCA CTAACACATT CAGACTCATC AAGGATTACC TAAGACGAGG AATTCTTGAT ATAACAAAAG TCGGCGGCTT TCATGTCAGG GAAGCTGATG AGGCTCTTTT TTCATCACAT AAATATCACG AAACGCTAAT CTATTTCGCA AAAGAAGAAG ATTCCAAACC GAACGAAGCC AGCCTTACCT TCTTCGACAA AGCGCCATAT CAAAATAAAT TACTCATCAT AAAAAAAGAC GGCAAGACCT ACTTTTACAA AGCATTGAAA CAAGAAAAAC CAACACTATG CTTCGTAATG ATCAACCACA CTGAAGACGA AGAAATAGTT GGCGACATTT ACAACCTTAT CGGACTCGCA CAAGTACTTT ATCTATCAAT GTCCTTAATC AAAAAAGATG GCACCATTAA AACCAATCCG TATTGCAAGC TTAGATCAAC ACTATCATAA
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Protein sequence | MIIGPSHVVR WKRLRDFFEI DSEFHGVGGL PIWHESIKSC SRTNNPFIMV GDFRFGNTYH LTHNENDAFI VKKEFINPEI DKLMYDKSIE SLEILQRDDI RLVFWCLLIR EYKNINEDKY FKNSTYQHPI WNLPAIESRF RNSIKLSDIL NYDLNFLFID SSNHPSIFGY YFLKKIHEGL PSPQALTLAL KAKKSFFKIF DYFKNDSFVV SGTTNTFRLI KDYLRRGILD ITKVGGFHVR EADEALFSSH KYHETLIYFA KEEDSKPNEA SLTFFDKAPY QNKLLIIKKD GKTYFYKALK QEKPTLCFVM INHTEDEEIV GDIYNLIGLA QVLYLSMSLI KKDGTIKTNP YCKLRSTLS
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