Gene PP_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1788 
Symbol 
ID1043316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2004657 
End bp2005736 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content37% 
IMG OID637145191 
Producthypothetical protein 
Protein accessionNP_743944 
Protein GI26988519 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0856032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00693374 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTATTG GCCCCTCGCA CGTAGTACGC TGGAAAAGGC TGAGAGATTT TTTTGAAATC 
GATAGTGAGT TTCATGGGGT CGGTGGGCTC CCGATATGGC ATGAGAGCAT CAAGAGCTGT
TCAAGAACAA ATAATCCATT CATCATGGTA GGTGACTTTA GATTCGGCAA CACTTATCAT
CTGACACATA ATGAGAACGA CGCCTTCATT GTAAAGAAAG AATTTATAAA CCCAGAAATA
GACAAGCTTA TGTATGATAA GTCTATTGAA AGCTTAGAAA TCCTTCAAAG AGATGATATA
AGACTAGTTT TCTGGTGCCT ATTGATCAGA GAATACAAAA ACATCAACGA GGATAAATAT
TTCAAGAACA GCACATACCA ACATCCCATT TGGAATCTAC CCGCAATTGA AAGCAGATTC
AGAAACAGCA TAAAACTTTC TGACATACTT AATTACGATC TTAACTTCTT GTTTATTGAC
TCAAGTAATC ATCCTTCAAT TTTTGGTTAT TACTTCCTCA AAAAAATCCA CGAAGGGTTG
CCTTCCCCGC AAGCACTAAC GTTGGCTCTG AAGGCAAAAA AATCGTTTTT TAAAATATTT
GATTATTTCA AAAACGACAG CTTTGTCGTA TCGGGAACCA CTAACACATT CAGACTCATC
AAGGATTACC TAAGACGAGG AATTCTTGAT ATAACAAAAG TCGGCGGCTT TCATGTCAGG
GAAGCTGATG AGGCTCTTTT TTCATCACAT AAATATCACG AAACGCTAAT CTATTTCGCA
AAAGAAGAAG ATTCCAAACC GAACGAAGCC AGCCTTACCT TCTTCGACAA AGCGCCATAT
CAAAATAAAT TACTCATCAT AAAAAAAGAC GGCAAGACCT ACTTTTACAA AGCATTGAAA
CAAGAAAAAC CAACACTATG CTTCGTAATG ATCAACCACA CTGAAGACGA AGAAATAGTT
GGCGACATTT ACAACCTTAT CGGACTCGCA CAAGTACTTT ATCTATCAAT GTCCTTAATC
AAAAAAGATG GCACCATTAA AACCAATCCG TATTGCAAGC TTAGATCAAC ACTATCATAA
 
Protein sequence
MIIGPSHVVR WKRLRDFFEI DSEFHGVGGL PIWHESIKSC SRTNNPFIMV GDFRFGNTYH 
LTHNENDAFI VKKEFINPEI DKLMYDKSIE SLEILQRDDI RLVFWCLLIR EYKNINEDKY
FKNSTYQHPI WNLPAIESRF RNSIKLSDIL NYDLNFLFID SSNHPSIFGY YFLKKIHEGL
PSPQALTLAL KAKKSFFKIF DYFKNDSFVV SGTTNTFRLI KDYLRRGILD ITKVGGFHVR
EADEALFSSH KYHETLIYFA KEEDSKPNEA SLTFFDKAPY QNKLLIIKKD GKTYFYKALK
QEKPTLCFVM INHTEDEEIV GDIYNLIGLA QVLYLSMSLI KKDGTIKTNP YCKLRSTLS