| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1768 |
|---|
| Symbol | serC |
|---|
| ID | 1043354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1973988 |
|---|
| End bp | 1975073 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637145171 |
|---|
| Product | phosphoserine aminotransferase |
|---|
| Protein accession | NP_743924 |
|---|
| Protein GI | 26988499 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1932] Phosphoserine aminotransferase |
|---|
| TIGRFAM ID | [TIGR01364] phosphoserine aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0882462 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.62461 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAAAC GAGCCTTTAA CTTCTGCGCA GGCCCTGCCG CGCTTCCTGA CGCTGTCCTG
CAGCGCGCAC AGGCCGAGAT GCTGGACTGG CGTGGCAAGG GGTTGTCGGT GATGGAAATG
AGCCATCGCA GCGACGATTA CGTGGCCATC GCCGAAAAGG CCGAGCAGGA CCTGCGTGAC
CTGCTGTCCG TCCCCTCCAA CTACAAGGTG CTGTTCCTGC AAGGCGGCGC CAGCCAGCAG
TTCGCTGAAA TCCCGCTGAA CCTGCTGCCG GAAAACGGCA CGGCCGACTA CATCGAAACC
GGCATCTGGT CGAAAAAGGC CATCGAGGAA GCGCGCCGTT TCGGCAACGT CAACGTCGCC
GCCACTGCCA AGCCTTACGA CTACCTGGCC ATCCCCGGCC AGAACGAGTG GAACCTGACC
AAAAACGCAG CCTACGTGCA CTATGCGTCC AACGAGACCA TCGGTGGCCT GCAGTTTGAC
TGGGTGCCGC AAACCGGTGA CGTGCCGCTG GTGGTCGATA TGTCGTCCGA CATCCTCTCG
CGCCCGATCG ATGTGTCGCA GTTCGGCCTG ATCTACGCCG GCGCGCAGAA GAATATCGGC
CCAAGCGGCC TGGTGGTGGT GATCGTGCGC GAAGACCTGT TGGGCCATGC CCGCAGCAGC
TGCCCGACCA TGCTCGACTA CAAGGTTTCG GCTGACAACG GCTCGATGTA CAACACCCCG
GCCACCTACT CCTGGTACCT CTCTGGCCTG GTCTTCGAGT GGCTGAAAGA GCAGGGCGGT
GTCGAGGCCA TGGAGCAGCG CAACCGTGCC AAGAAAGACC GCCTTTACGG CTTCATCGAC
CGCAGCGAGT TCTACACCAA CCCGATCAGC GTCAACGCCC GTTCGTGGAT GAACGTGCCG
TTCCGCCTGG CTGACGAGCG CCTGGACAAG GCCTTCCTCG CTGGCGCCGA CGCGCGTGGC
CTGCTCAACC TCAAGGGCCA CCGTTCGGTT GGCGGCATGC GCGCCTCCAT CTACAACGCC
CTGGGCCTGG AAGCGGTAGA AGCGCTGGTA GGCTACATGG CTGAATTCGA GAAGGAGCAT
GGCTGA
|
|---|
| Protein sequence | MSKRAFNFCA GPAALPDAVL QRAQAEMLDW RGKGLSVMEM SHRSDDYVAI AEKAEQDLRD
LLSVPSNYKV LFLQGGASQQ FAEIPLNLLP ENGTADYIET GIWSKKAIEE ARRFGNVNVA
ATAKPYDYLA IPGQNEWNLT KNAAYVHYAS NETIGGLQFD WVPQTGDVPL VVDMSSDILS
RPIDVSQFGL IYAGAQKNIG PSGLVVVIVR EDLLGHARSS CPTMLDYKVS ADNGSMYNTP
ATYSWYLSGL VFEWLKEQGG VEAMEQRNRA KKDRLYGFID RSEFYTNPIS VNARSWMNVP
FRLADERLDK AFLAGADARG LLNLKGHRSV GGMRASIYNA LGLEAVEALV GYMAEFEKEH
G
|
|---|
| |