Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1594 |
Symbol | frr |
ID | 1045125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1787951 |
End bp | 1788508 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637144994 |
Product | ribosome recycling factor |
Protein accession | NP_743751 |
Protein GI | 26988326 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0233] Ribosome recycling factor |
TIGRFAM ID | [TIGR00496] ribosome recycling factor |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.409738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.821893 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAACG ACATCAAGAA AGACGCGCAG GAGCGCATGG GCAAGTCCAT CGAAGCCCTG TCCCGCAACC TGGCTGCAAT CCGCACCGGT CGCGCTCACC CAAGCATTCT GGACAGCGTC AAGGTTACCG CCTGGGGCAG CGAAATGCCG CTGAACCAGG TCGCCGCGAT CACCGTCGAA GATGCCCGCA CCCTGAAGAT CGTCGCTCAC GACAAGAACC TCAGCGCTGC CATCGAAAAG GCCATCCTCA CCTCCGATCT GGGCCTTAAC CCGTCCAGCG CCGGTACCAC CATCCGTGTG CCGATGCCGG CCCTGACCGA GGAAACCCGC AAGGGCTACA CCAAGCAGGC CAGCGGTGTT GCCGAGGATG CCAAGGTAGC CGTGCGCAAC GTGCGCCGCG ACGCCCTGGC TGACCTGAAA AAGCTGACCA AGGACAAGGA AATCAGCGAA GACGAAGAGC GTCGCGCCGC GGACGAGATC CAGAAGCTGA CCGACAAGTT CGTCGCCGAA GTGGATGCTG CCTTCAAAGC CAAGGAAAAG GACCTGATGG CCGTCTAA
|
Protein sequence | MINDIKKDAQ ERMGKSIEAL SRNLAAIRTG RAHPSILDSV KVTAWGSEMP LNQVAAITVE DARTLKIVAH DKNLSAAIEK AILTSDLGLN PSSAGTTIRV PMPALTEETR KGYTKQASGV AEDAKVAVRN VRRDALADLK KLTKDKEISE DEERRAADEI QKLTDKFVAE VDAAFKAKEK DLMAV
|
| |