Gene PP_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1594 
Symbolfrr 
ID1045125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1787951 
End bp1788508 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content61% 
IMG OID637144994 
Productribosome recycling factor 
Protein accessionNP_743751 
Protein GI26988326 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.409738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.821893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACG ACATCAAGAA AGACGCGCAG GAGCGCATGG GCAAGTCCAT CGAAGCCCTG 
TCCCGCAACC TGGCTGCAAT CCGCACCGGT CGCGCTCACC CAAGCATTCT GGACAGCGTC
AAGGTTACCG CCTGGGGCAG CGAAATGCCG CTGAACCAGG TCGCCGCGAT CACCGTCGAA
GATGCCCGCA CCCTGAAGAT CGTCGCTCAC GACAAGAACC TCAGCGCTGC CATCGAAAAG
GCCATCCTCA CCTCCGATCT GGGCCTTAAC CCGTCCAGCG CCGGTACCAC CATCCGTGTG
CCGATGCCGG CCCTGACCGA GGAAACCCGC AAGGGCTACA CCAAGCAGGC CAGCGGTGTT
GCCGAGGATG CCAAGGTAGC CGTGCGCAAC GTGCGCCGCG ACGCCCTGGC TGACCTGAAA
AAGCTGACCA AGGACAAGGA AATCAGCGAA GACGAAGAGC GTCGCGCCGC GGACGAGATC
CAGAAGCTGA CCGACAAGTT CGTCGCCGAA GTGGATGCTG CCTTCAAAGC CAAGGAAAAG
GACCTGATGG CCGTCTAA
 
Protein sequence
MINDIKKDAQ ERMGKSIEAL SRNLAAIRTG RAHPSILDSV KVTAWGSEMP LNQVAAITVE 
DARTLKIVAH DKNLSAAIEK AILTSDLGLN PSSAGTTIRV PMPALTEETR KGYTKQASGV
AEDAKVAVRN VRRDALADLK KLTKDKEISE DEERRAADEI QKLTDKFVAE VDAAFKAKEK
DLMAV