Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1522 |
Symbol | cspA-1 |
ID | 1045491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1728393 |
End bp | 1728602 |
Gene Length | 210 bp |
Protein Length | 69 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637144922 |
Product | cold shock protein CspA |
Protein accession | NP_743679 |
Protein GI | 26988254 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.310546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.49084 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCTC GTGAGACTGG GAATGTAAAG TGGTTCAACG ATGCCAAGGG TTATGGCTTC ATTCAGCGCG AAGGTGGTGC GGATGTATTC GTCCACTATC GGGCGATCCG CGGTGAGGGG CATCGTACCC TGGTCGAAGG GCAGCGGGTG GAGTACGCCT GCGTGCAGGG CCAGAAAGGC CTGCAAGCCG AAGACGTAGT GGGCCTCTGA
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Protein sequence | MSSRETGNVK WFNDAKGYGF IQREGGADVF VHYRAIRGEG HRTLVEGQRV EYACVQGQKG LQAEDVVGL
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