Gene PP_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1421 
Symbol 
ID1045863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1621083 
End bp1622474 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content66% 
IMG OID637144822 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionNP_743579 
Protein GI26988154 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCACCG CGATGCGTGA CAACGGCAGC CTGCGCGGGC GCTTGCTGGG TAATTTGGCG 
CTGTTGCTGG TGGTGCTGAT GCTGGCCAGC GGCCTTAGCG CCTACTGGAA TGGCCGCGAG
GCCGCCGACA CTGCCTACGA CCGCACCCTG CTGGCTTCGG CGAGAACCAT CGCCGCGGGC
CTGTCGCAGC GCGATGGTTC GTTGAGCGCG GATGTGCCTT ACGTGGCGCT GGACACGTTT
GCCTATGACA GTGCGGGGCG CATTTACTAT CAGGTGCTGG ATATCAAGCA GAGGCTGATT
TCTGGCTACG AGAACCTGCC GCCACCGCCG CCGGGTACGC CGCGCACCGA TGACTATCCG
GCATTGGCAC GGTTCTACAA CGCCACTTAC CTGGGCCAGG ACGTTCGTGT GGTCAGCCTG
CTGAAGCCGG TCAGCGAGCC GAACATGAAC GGCATGGCAG AGATTCGCGT AGCCGAAACC
GAGGAAGCGC GGGTGCGCAT GGCCCGAGGG TTGATGGCCG ATACCCTGCT GCGCCTGGGT
ATGCTGGCAC TGGGGGCGTT GGTGATGGTG TGGTTTGCCG TGAGTGCCGC GTTGCGGCCG
TTGGAGCGCC TTCGCACAGC GGTGGAAGAA CGCCAGCCGG ACGACTTGCG AGCGTTGCCG
GTGGTGCAGG TGCAGCGCGA GCTGGGCCCG CTGGTGCGCG CCTTGAACCA CTTTACCGAG
CGCTTGCGCG GCCAGTTCGA GCGCCAGGCG CAGTTCATTG CCGACGCGGC CCACGAACTG
CGAACGCCGC TGGCGGCGTT GAAGGCACGT GTCGAGCTGG GCTTGCGCTC GGCCGAGCCG
CAGGAGTGGC GGCAGACCTT GGAGTCGGCA GCCCAGGGCA CCGACAGGCT GACCCACCTG
GCCAACCAGC TGTTGTCCCT GGCGCGGGTC GAGAATGGCG CACGGGCGAT TGCCGAAGGC
GGTGCGCAGC GTCTGGACTT GAGTCAGTTG GCCCGCGAGC TGGGCATGGC CATGGCGCCT
TTGGCGCACA AGCGCGGGGT GGCGCTGGCG CTGGAGGCCG AGGCGCCGGT GTGGTTGAAG
GGGGAGCCGA CATTGCTCAA CGAGTTGTTG AGCAACCTGG TGGACAATGC CTTGGCGCAT
ACGCCAGCGG GTGGCAATGT GATTTTGCGG GTAATGGCGC CGGCAGTGCT GGAAGTGGAA
GACGACGGGC CAGGTATTCC CGTGGCCGAG CGCGAACGGG TGTTCGAGCG GTTCTACCGG
CGAAGTGCGC AGGGCAGTGG GTTAGGGCTG GCGATCGTTG GCGAGATCTG TCGGGCGCAC
CTGGCGCAAG TGACCCTGCA CGATGGCGAG AAGGGCGGGT TGCGGGTGCG GGTGAGCTTT
ATCGCGGATT GA
 
Protein sequence
MSTAMRDNGS LRGRLLGNLA LLLVVLMLAS GLSAYWNGRE AADTAYDRTL LASARTIAAG 
LSQRDGSLSA DVPYVALDTF AYDSAGRIYY QVLDIKQRLI SGYENLPPPP PGTPRTDDYP
ALARFYNATY LGQDVRVVSL LKPVSEPNMN GMAEIRVAET EEARVRMARG LMADTLLRLG
MLALGALVMV WFAVSAALRP LERLRTAVEE RQPDDLRALP VVQVQRELGP LVRALNHFTE
RLRGQFERQA QFIADAAHEL RTPLAALKAR VELGLRSAEP QEWRQTLESA AQGTDRLTHL
ANQLLSLARV ENGARAIAEG GAQRLDLSQL ARELGMAMAP LAHKRGVALA LEAEAPVWLK
GEPTLLNELL SNLVDNALAH TPAGGNVILR VMAPAVLEVE DDGPGIPVAE RERVFERFYR
RSAQGSGLGL AIVGEICRAH LAQVTLHDGE KGGLRVRVSF IAD