Gene PP_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1417 
Symbol 
ID1045878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1617256 
End bp1617741 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content63% 
IMG OID637144818 
Producttricarboxylate transport protein TctB, putative 
Protein accessionNP_743575 
Protein GI26988150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.342625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCAATC CCAACGAGGA TTCCCCAATG ATCCTTCAAC GCATTTTCGC CTTGGCCCTG 
CTGGCGATGT GTGCCGCCCT GGCCGTGATG GCCTGGCCCT ATCAGGCTGC ATTCTCCTAT
GAACCGGTGG GCCCGCGCGC TTACCCGCTG CTGGTGCTCG GCCTGATGGG GCTGGGCCTG
CTGTACCTGG TGTTCCGCCC AACGCCCATC GTGCGCAAGG ATGACGAACC GGAACTGGAC
CGCGAGACCC TGATCAAGAT CACCGCCTGT GTCGGCCTGC TGATCGTCTT CGCCGCCACT
TTCGAAGCGC TCGGCTTCAT CCTCAGCGCC ATCCTGGTCG GCCTGCCCAT GGCTCGGCTG
TACGGTGGCC GCTGGCTGCA AAGCGCCATT GTGGTGGCCG GCATGAGCAT TTTCCTCTAC
TGGCTGTTCG ACCGCGTGAT GGACGTGCCC CTGCCACTTG GCCTGCTGAG CGTACTGGAG
AACTGA
 
Protein sequence
MSNPNEDSPM ILQRIFALAL LAMCAALAVM AWPYQAAFSY EPVGPRAYPL LVLGLMGLGL 
LYLVFRPTPI VRKDDEPELD RETLIKITAC VGLLIVFAAT FEALGFILSA ILVGLPMARL
YGGRWLQSAI VVAGMSIFLY WLFDRVMDVP LPLGLLSVLE N