Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1417 |
Symbol | |
ID | 1045878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1617256 |
End bp | 1617741 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637144818 |
Product | tricarboxylate transport protein TctB, putative |
Protein accession | NP_743575 |
Protein GI | 26988150 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.342625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCAATC CCAACGAGGA TTCCCCAATG ATCCTTCAAC GCATTTTCGC CTTGGCCCTG CTGGCGATGT GTGCCGCCCT GGCCGTGATG GCCTGGCCCT ATCAGGCTGC ATTCTCCTAT GAACCGGTGG GCCCGCGCGC TTACCCGCTG CTGGTGCTCG GCCTGATGGG GCTGGGCCTG CTGTACCTGG TGTTCCGCCC AACGCCCATC GTGCGCAAGG ATGACGAACC GGAACTGGAC CGCGAGACCC TGATCAAGAT CACCGCCTGT GTCGGCCTGC TGATCGTCTT CGCCGCCACT TTCGAAGCGC TCGGCTTCAT CCTCAGCGCC ATCCTGGTCG GCCTGCCCAT GGCTCGGCTG TACGGTGGCC GCTGGCTGCA AAGCGCCATT GTGGTGGCCG GCATGAGCAT TTTCCTCTAC TGGCTGTTCG ACCGCGTGAT GGACGTGCCC CTGCCACTTG GCCTGCTGAG CGTACTGGAG AACTGA
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Protein sequence | MSNPNEDSPM ILQRIFALAL LAMCAALAVM AWPYQAAFSY EPVGPRAYPL LVLGLMGLGL LYLVFRPTPI VRKDDEPELD RETLIKITAC VGLLIVFAAT FEALGFILSA ILVGLPMARL YGGRWLQSAI VVAGMSIFLY WLFDRVMDVP LPLGLLSVLE N
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