| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1377 |
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| Symbol | pcaF |
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| ID | 1041755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1569186 |
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| End bp | 1570388 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637144778 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | NP_743536 |
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| Protein GI | 26988111 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.388007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.268922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGACG TATTCATCTG TGACGCCATC CGTACCCCGA TCGGCCGCTT CGGCGGCGCC
CTGGCCAGCG TGCGGGCCGA CGACCTGGCC GCCGTGCCGC TGAAGGCGCT GATCGAGCGC
AACCCTGGCG TGCAGTGGGA CCAGGTAGAC GAAGTGTTCT TCGGCTGCGC CAACCAGGCC
GGTGAAGACA ACCGCAACGT GGCCCGCATG GCACTGCTGC TGGCCGGCCT GCCGGAAAGC
ATCCCGGGCG TCACCCTGAA CCGTCTGTGC GCGTCGGGCA TGGATGCCGT CGGCACCGCG
TTCCGCGCCA TCGCCAGCGG CGAGATGGAG CTGGTGATTG CCGGTGGCGT CGAGTCGATG
TCGCGCGCCC CGTTCGTCAT GGGCAAGGCT GAAAGCGCCT ATTCGCGCAA CATGAAGCTG
GAAGACACCA CCATTGGCTG GCGTTTCATC AACCCGCTGA TGAAGAGCCA GTACGGTGTG
GATTCCATGC CGGAAACCGC CGACAACGTG GCCGACGACT ATCAGGTTTC GCGTGCTGAT
CAGGACGCTT TCGCCCTGCG CAGCCAGCAG AAGGCTGCCG CTGCGCAGGC TGCCGGCTTC
TTTGCCGAAG AAATCGTGCC GGTGCGTATC GCTCACAAGA AGGGCGAAAT CATCGTCGAA
CGTGACGAAC ACCTGCGCCC GGAAACCACG CTGGAGGCGC TGACCAAGCT CAAACCGGTC
AACGGCCCGG ACAAGACGGT CACCGCCGGC AACGCCTCGG GCGTGAACGA CGGTGCTGCG
GCGATGATCC TGGCCTCGGC CGCAGCGGTG AAGAAACACG GCCTGACTCC GCGTGCCCGC
GTTCTGGGCA TGGCCAGCGG CGGCGTTGCG CCACGTGTCA TGGGCATTGG CCCGGTGCCG
GCGGTGCGCA AACTGACCGA GCGTCTGGGG ATAGCGGTAA GTGATTTCGA CGTGATCGAG
CTTAACGAAG CGTTTGCCAG CCAAGGCCTG GCGGTGCTGC GTGAGCTGGG TGTGGCTGAC
GATGCGCCCC AGGTAAACCC TAATGGCGGT GCCATTGCCC TGGGCCACCC CCTGGGCATG
AGCGGTGCAC GCCTGGTACT GACTGCGTTG CACCAGCTGG AGAAGAGTGG CGGTCGCAAG
GGCCTGGCGA CCATGTGTGT GGGTGTCGGC CAAGGTCTGG CGTTGGCCAT CGAGCGGGTT
TGA
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| Protein sequence | MHDVFICDAI RTPIGRFGGA LASVRADDLA AVPLKALIER NPGVQWDQVD EVFFGCANQA
GEDNRNVARM ALLLAGLPES IPGVTLNRLC ASGMDAVGTA FRAIASGEME LVIAGGVESM
SRAPFVMGKA ESAYSRNMKL EDTTIGWRFI NPLMKSQYGV DSMPETADNV ADDYQVSRAD
QDAFALRSQQ KAAAAQAAGF FAEEIVPVRI AHKKGEIIVE RDEHLRPETT LEALTKLKPV
NGPDKTVTAG NASGVNDGAA AMILASAAAV KKHGLTPRAR VLGMASGGVA PRVMGIGPVP
AVRKLTERLG IAVSDFDVIE LNEAFASQGL AVLRELGVAD DAPQVNPNGG AIALGHPLGM
SGARLVLTAL HQLEKSGGRK GLATMCVGVG QGLALAIERV
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