Gene PP_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1369 
Symbol 
ID1043928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1558165 
End bp1558896 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content63% 
IMG OID637144770 
Producthypothetical protein 
Protein accessionNP_743528 
Protein GI26988103 
COG category[R] General function prediction only 
COG ID[COG3233] Predicted deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.271158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTGT TGCATGATGT TGCCCCGGAA ACCTGGCCGG ACTATGAACC GTTCGTAGGG 
GCCGTGGACG CGCTGGGCCA CGTGCCAATG ACATGGCTGG TGGTCCCGGA CTTCCATCGA
CGCAATCCGC TGCACCAGGC ACCTTCGTTC TGCCGTCTGC TGGACGAACG CCTTGCCAAA
GGCGACGAAC TGGCGCTTCA CGGCTATGCC CATGCTGACG AAGGCCCCGT ACCGCGCAGC
CCCGTCGACT ACTTCATGCG GCGCATTTAT ACCCATGAAG GCGAGTTCTA CAGCCTTGAT
GAGAACGAAG CGCTTACCCG GCTACAGGAG GGCCTGGCAC TGTTCGAGGA CCAAGGGTGG
CCTGTGGCAG GGTTTGTCGC ACCGGCCTGG CTCATGAGCC AGGGCACGCG GCAAGCGCTG
TGCCGCCTGC CACTGAAATA CACCAGTACA CCTCAGCATC TGTACCGCTT GCCAGACTTT
ACGGCGATTG ATGCGCCAGG CCTGGTCTGG AGCGCCCGGA GCGCATGGCG TCGCAAACTG
TCCCGCACGC TGTGCGACTG GCAATGCCAG CGCTGGCGGG GCGCGAGCAC GTTGCGCTTG
GGACTGCACC CTGTAGACAT GCGCCATCGC TCATCCCGTG ACTATTGGTT GCGCACGCTG
GAGAGACTGT TGAAGGATGG CCGCGAACCG CTGACCAAGT CTGCCTGGCT GGAGCGCCAG
GGGGCAGCAT GA
 
Protein sequence
MLVLHDVAPE TWPDYEPFVG AVDALGHVPM TWLVVPDFHR RNPLHQAPSF CRLLDERLAK 
GDELALHGYA HADEGPVPRS PVDYFMRRIY THEGEFYSLD ENEALTRLQE GLALFEDQGW
PVAGFVAPAW LMSQGTRQAL CRLPLKYTST PQHLYRLPDF TAIDAPGLVW SARSAWRRKL
SRTLCDWQCQ RWRGASTLRL GLHPVDMRHR SSRDYWLRTL ERLLKDGREP LTKSAWLERQ
GAA