Gene PP_1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1310 
Symbol 
ID1042638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1497411 
End bp1498046 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content65% 
IMG OID637144712 
Producthypothetical protein 
Protein accessionNP_743470 
Protein GI26988045 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTGTCC GCGAAACCCC CTTGTTCATC GATGGCCCCA GCGGCCAGCT GGAAGCCTTG 
TACCTGGACG TGGCCAATGC CCGTGGCGCG GTGCTGATCT GCCACCCCAA CCCGGTCCAG
GGCGGCACCA TGCTCAACAA GGTGGTCTCG ACCCTGCAGC GCACCGCACG TGATGCCGGT
TATGTGACCC TGCGTTTCAA CTACCGTGGC GTCGGCCAGA GCGCCGGCAG CCACGACATG
GGCGCTGGCG AAGTGGCCGA TGCCGAGGCC GCTGCAGCAT GGCTGCGTGC CAGGCACCCC
GGGCTACCGC TGGTGCTGAT GGGCTTTTCG TTCGGTGGTT TCGTTGCCAC CAGCCTGGCC
GGGCGCCTTG AAACTGCAGG CGTCGAGTTG CAGCACCTGT TCATGATCGC CCCGGCGGTC
ATGCGCCTGA CCGCCGAATT CCCGATGCCG CAGCGCTGCC CGCTCACCGT GGTGCAGCCG
GACGCCGATG AAGTCGTCGC GCCGCAGCTG GTTTACGAAT GGTCCGACAG CCTGTCGCGT
CCCCATGAGC TGCTGAAAGT GGCAGAATGC GGACACTTCT TCCATGGCAA GCTGACCGAT
CTGAAGGATC TGCTGCTGCC GCGCCTTTCG AACTGA
 
Protein sequence
MLVRETPLFI DGPSGQLEAL YLDVANARGA VLICHPNPVQ GGTMLNKVVS TLQRTARDAG 
YVTLRFNYRG VGQSAGSHDM GAGEVADAEA AAAWLRARHP GLPLVLMGFS FGGFVATSLA
GRLETAGVEL QHLFMIAPAV MRLTAEFPMP QRCPLTVVQP DADEVVAPQL VYEWSDSLSR
PHELLKVAEC GHFFHGKLTD LKDLLLPRLS N