| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1266 |
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| Symbol | |
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| ID | 1041860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1448279 |
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| End bp | 1449139 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637144668 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | NP_743426 |
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| Protein GI | 26988001 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.736705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT TCTTCAGCCT GATCGCCACC CTGCTGGTGC TGGTCGCTGC CGTGGCCATC
GGTCGCCAGT TGTGGCTGCA CTACATGACC ACGCCATGGA CCCGTGATGG CCGTGTGCGT
GCCGACATCA TCAACGTCGC AGCCGACGTG CCCGGCTACG TGGTGGATGT ACCGGTCAAG
GACAACCAGC GGGTGAAGAA GGGCGACCTG CTGATCCAGA TCGACCCTGA GCACTACCAG
TTGGCCGTCG ACCAGGCCAA GGCACTGGTC GCCTCGCGCA AGGCCACCTG GGAAATGCGC
AAGGTCAATG CCAAGCGCCG TGCCGACATG GACAACCTGG TGATTTCCAA GGAAAACCGC
GACGACGCCA GCAACATCGC CAATTCCGCC CAAGCCGATT ATCAACAAGC CCTTGCCGAG
TTGGCCGCAG CCGAGCTGAA CCTCAAGCGT ACGCACATCG TGGCGACGGT TGACGGCTAT
GTGACCAACC TGAATATCCA CAAGGGCGAC TATGCGCGTA CCGGTGAAGC GGTGATGGCG
GTGGTCGACG AGAATTCGTT CTGGGTTTAC GGGTTCTTCG AGGAGACCAA GCTGCCGCAT
GTGAAGGTGG GTGACCAGGC CGAATTGCAG ATGATGAGCG GCGAGCGTCT CAAGGGGCAT
GTGGAGAGCA TCGCCCGCGG CATCTATGAC CGCGACAACC CACAGAGCCG CGAGCTGATC
GCCGACGTGA ACCCGACCTT CAACTGGGTG CGGCTGGCAC AGCGGGTGCC GGTGCGCATT
CACATCGATG AAGTGCCGGA AGGGTTTTTG CTGGCGGCGG GGACGACGTG TACGGTGGTA
GTCAAGCCTG GCGAAGGTTG A
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| Protein sequence | MKKFFSLIAT LLVLVAAVAI GRQLWLHYMT TPWTRDGRVR ADIINVAADV PGYVVDVPVK
DNQRVKKGDL LIQIDPEHYQ LAVDQAKALV ASRKATWEMR KVNAKRRADM DNLVISKENR
DDASNIANSA QADYQQALAE LAAAELNLKR THIVATVDGY VTNLNIHKGD YARTGEAVMA
VVDENSFWVY GFFEETKLPH VKVGDQAELQ MMSGERLKGH VESIARGIYD RDNPQSRELI
ADVNPTFNWV RLAQRVPVRI HIDEVPEGFL LAAGTTCTVV VKPGEG
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