| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1077 |
|---|
| Symbol | |
|---|
| ID | 1044735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1236489 |
|---|
| End bp | 1236959 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637144472 |
|---|
| Product | ybaK/ebsC protein |
|---|
| Protein accession | NP_743238 |
|---|
| Protein GI | 26987813 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2606] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00011] ybaK/ebsC protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.593377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCG CCCTAGACCT GTTGAAGAAG CACCGTGCCG AGCATCGTGT GCACAGTTAT
GAACATGACC CGAAGTCGGC GTCGTATGGC CTGGAGGCGG CAGAAAAGCT CGGGCTCGAC
CCGCAACAGG TGTTCAAGAC GTTGCTGGCA AGCAGCGAGA AAGGGGAATT GCTGGTAGCG
GTTGTGCCTG TGGTGGGGAC CTTGGACCTC AAGGCCCTGG CCCATGCTGC CGGGGTAAAA
AAGTGCGAGA TGGCCGACCC GGCAGCGGCG CAGCGGGCGA CCGGTTACCT GGTGGGCGGC
ATCAGCCCGC TGGGGCAGAA GAAGCGCCTG CGGACCTTTA TTGATGACTC GGCGCAGAAT
TTTGCAACTA TCCATGTCAG CGCCGGCAGG CGTGGCCTGG AAGTGGAGTT GGCCGCAGCG
GTGCTGGCGG AGTATACGCA GGGCACGTTT GCCGGGATTG GTCGAGGCTG A
|
|---|
| Protein sequence | MTPALDLLKK HRAEHRVHSY EHDPKSASYG LEAAEKLGLD PQQVFKTLLA SSEKGELLVA
VVPVVGTLDL KALAHAAGVK KCEMADPAAA QRATGYLVGG ISPLGQKKRL RTFIDDSAQN
FATIHVSAGR RGLEVELAAA VLAEYTQGTF AGIGRG
|
|---|
| |