Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1045 |
Symbol | xcpP |
ID | 1044337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1195509 |
End bp | 1195934 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637144440 |
Product | type II secretion pathway protein XcpP |
Protein accession | NP_743206 |
Protein GI | 26987781 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0987719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGCTCA CCTCGCGTCT GCTCACCGGT GCTGGCCTGA CCCTGGCCGG CTGGCTTTCT GCGCAGTGTG TGCTGCAGTT GAGCCGGCAG CCACACCCGG CCACGGCGCC TGCGGTGGCC GACAGCCCGC TGCCCGGGCT GATGGTTGGT CACTGGCAGG CGCCGCCCGA CGACGGCGCC ATCACCATCA CTCGTCTGCC GCTGCAATAC CTCGGCGGCC TCAAGGCCCA GCCATTGGCC GCCAGTGTGG TGGTGCTGCG CTACGGCGAG CAAGTGCGCA CCCTGGCCCG CGGTCAGCGC CTGGCGCCAG GGATCGTGCT GCAGGACATC GACAGCGATG GCCTGATTTT CAACAACCAG GGGCGGCGTG AGCGCCTGCC CTGGCCGCCA CGCCCCGCCG TGACCGGCTT CAAGCGGCAA GGATGA
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Protein sequence | MMLTSRLLTG AGLTLAGWLS AQCVLQLSRQ PHPATAPAVA DSPLPGLMVG HWQAPPDDGA ITITRLPLQY LGGLKAQPLA ASVVVLRYGE QVRTLARGQR LAPGIVLQDI DSDGLIFNNQ GRRERLPWPP RPAVTGFKRQ G
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