Gene PP_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1045 
SymbolxcpP 
ID1044337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1195509 
End bp1195934 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content70% 
IMG OID637144440 
Producttype II secretion pathway protein XcpP 
Protein accessionNP_743206 
Protein GI26987781 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0987719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGCTCA CCTCGCGTCT GCTCACCGGT GCTGGCCTGA CCCTGGCCGG CTGGCTTTCT 
GCGCAGTGTG TGCTGCAGTT GAGCCGGCAG CCACACCCGG CCACGGCGCC TGCGGTGGCC
GACAGCCCGC TGCCCGGGCT GATGGTTGGT CACTGGCAGG CGCCGCCCGA CGACGGCGCC
ATCACCATCA CTCGTCTGCC GCTGCAATAC CTCGGCGGCC TCAAGGCCCA GCCATTGGCC
GCCAGTGTGG TGGTGCTGCG CTACGGCGAG CAAGTGCGCA CCCTGGCCCG CGGTCAGCGC
CTGGCGCCAG GGATCGTGCT GCAGGACATC GACAGCGATG GCCTGATTTT CAACAACCAG
GGGCGGCGTG AGCGCCTGCC CTGGCCGCCA CGCCCCGCCG TGACCGGCTT CAAGCGGCAA
GGATGA
 
Protein sequence
MMLTSRLLTG AGLTLAGWLS AQCVLQLSRQ PHPATAPAVA DSPLPGLMVG HWQAPPDDGA 
ITITRLPLQY LGGLKAQPLA ASVVVLRYGE QVRTLARGQR LAPGIVLQDI DSDGLIFNNQ
GRRERLPWPP RPAVTGFKRQ G