| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0880 |
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| Symbol | dppC |
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| ID | 1044761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1020037 |
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| End bp | 1020963 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637144275 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | NP_743041 |
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| Protein GI | 26987616 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTAGCC CGATTCCAAA ATCCGTGTCA CCGGCCAGCC CGGTGGACCA GAGCCTGCTC
TACCCCTCCC CGTACAAAGA ATTCTGGCAA GCCTTCGCGC GCAACAAGGG CGCGGTCATG
GGCCTGGCCT TCATGTGCCT GGTGGTGTTC TGCGCGCTGT TCGCGCCTTG GGTCGCCCCG
CATGACCCGA GCGAGCAGTA CCGCGACTTC CTGCTGACCC CGCCGGTGTG GCTGGAAGGC
GGCACCTGGC AGTTCATCCT GGGCACCGAC GAACTGGGCC GTGATCTGCT TTCGCGGCTG
ATTCAGGGTG CACGGCTATC GCTGCTGATC GGCCTGTCGT CAGTGGTGAT GTCACTGATC
CCGGGCATTC TCCTTGGCCT GCTGGCCGGC TTTTTCCCGC AGTTGCTCGG CCCGTCGATC
ATGCGCCTGA TGGACGTGAT GCTGGCGCTG CCGTCACTGC TGCTGGCTGT GGCCATCGTC
GCCATCCTCG GCCCTGGCCT GATCAACACC GTGATCGCCA TCGCCATCGT TTCCCTGCCG
TCCTACGTGC GCCTGACCCG CGCCGCGGTG ATGGGCGAAC TGAACCGCGA CTACGTCACC
GCTGCCCGCC TGGCCGGCGC CGGCTTGCCC CGGCTGATGT TCGTCACCGT GCTGCCCAAC
TGCATGGCAC CGCTGATCGT GCAGGCGACC CTGAGTTTTT CCTCGGCGAT CCTCGACGCC
GCTGCGCTGG GTTTCCTCGG CCTCGGCGTG CAGCCGCCTA CCCCCGAGTG GGGCACCATG
CTGGCTTCGG CCCGGGATTA CATCGAGCGC GCCTGGTGGG TGGTAAGCCT GCCCGGCCTG
ACCATCCTGC TCAGTGTGCT GGCAATCAAC CTGATGGGCG ACGGCCTGCG CGATGCGCTG
GACCCGAAAC TCAAGAATGC CGCCTGA
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| Protein sequence | MTSPIPKSVS PASPVDQSLL YPSPYKEFWQ AFARNKGAVM GLAFMCLVVF CALFAPWVAP
HDPSEQYRDF LLTPPVWLEG GTWQFILGTD ELGRDLLSRL IQGARLSLLI GLSSVVMSLI
PGILLGLLAG FFPQLLGPSI MRLMDVMLAL PSLLLAVAIV AILGPGLINT VIAIAIVSLP
SYVRLTRAAV MGELNRDYVT AARLAGAGLP RLMFVTVLPN CMAPLIVQAT LSFSSAILDA
AALGFLGLGV QPPTPEWGTM LASARDYIER AWWVVSLPGL TILLSVLAIN LMGDGLRDAL
DPKLKNAA
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