Gene PP_0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0866 
Symbol 
ID1044743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1003974 
End bp1004960 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content65% 
IMG OID637144261 
Productanti-FecI sigma factor, FecR 
Protein accessionNP_743027 
Protein GI26987602 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGTC AGGAGGCCTT TTCGATGAAA CAGCACGGTA CCGATGCCGT CCGCGAGCAG 
GCGGCCGCAT GGTTCGCCCG CGTGCAGGAC GCACCTCGGG ATGCCGGGCT GCACAAGCAG
TTGCATGCCT GGCTGGCGAG CGACGAGCAC CACCGGGAAG AATATGAGCA TCTCTGCCGC
GTGTGGCAGG CCGCCGACTT CATTCCACGC CAGCACCTGG AGGCGCTGTG CCGGCCAGAC
CCGGTGCAGC AACTGCCACG ACGGCGTTTC ATGCGCCAGG CGTTGGCCGC CAGTGTCGCG
GTAGTGGCGC TGGGCCTGGG CTGGAGCGGC TGGCACCACC TGCAACTGAA CCATCAGGGC
AGCCTGCAGA CGGCCTTCAA TGAGCGCCGT CAGGTCGAAC TGCCGGATGG CTCGCATCTG
GAGCTCAATG GCAACACGCA GTTGCAGGTC GAGTTCAGCG CCGGCCAGCG GCACGTGCGC
CTGAACGCTG GTGAAGTGAT GTTCAGCGTC GCCCATGACA GTAACCGGCC GTTTGTGGTC
GACACTGCCC AGGGCAGTGT GATCGTCACA GGTACCCGCT TTGACGTCCG CCTGGACCCA
GCCAGCACCC GTGTGGCGGT GGAACAGGGG TCGGTGCGGG TGCAGGGCAA GGGCGACTCG
CCGGCGCAAC TGACGGCCGG GCAGGGGTCG CATATAGATG CACAGGGCCT GGTCGCCGCA
CCCTATGCGG TCAACACCGG CGCCATTACC GCATGGCGAC AGGGCAAGCT GGTGTTCGAC
AACGCAACCC TCGCCGAAGT AGTGGCCGAA ACCTCGCGCT ACCGTCGCCA GCCATTGCGG
GTCGCCCCTG GGAAAGTCGC GCGGCTGCGC CTGTCCGGCA CCTTCAGTAC CAACGATACA
GACGCTCTGC TGCGGGCCTT GCCGAGCATC CTCCCGGTGG CCATCAAAGC CCATGAAGAC
GGCTCCAGCG AAATAATCGC CAAATAG
 
Protein sequence
MKSQEAFSMK QHGTDAVREQ AAAWFARVQD APRDAGLHKQ LHAWLASDEH HREEYEHLCR 
VWQAADFIPR QHLEALCRPD PVQQLPRRRF MRQALAASVA VVALGLGWSG WHHLQLNHQG
SLQTAFNERR QVELPDGSHL ELNGNTQLQV EFSAGQRHVR LNAGEVMFSV AHDSNRPFVV
DTAQGSVIVT GTRFDVRLDP ASTRVAVEQG SVRVQGKGDS PAQLTAGQGS HIDAQGLVAA
PYAVNTGAIT AWRQGKLVFD NATLAEVVAE TSRYRRQPLR VAPGKVARLR LSGTFSTNDT
DALLRALPSI LPVAIKAHED GSSEIIAK