| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0851 |
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| Symbol | pilF |
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| ID | 1044718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 985237 |
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| End bp | 986004 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637144246 |
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| Product | type IV pilus biogenesis/stability protein PilW |
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| Protein accession | NP_743012 |
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| Protein GI | 26987587 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCATGA GCCTGCGTGC CGCGCTGTCG ATCCTTGCGC TTTCGCTGCT GGCCGGCTGC
GTGTCGGGCG GCGCGAGCGA CCCCTTGGCC AGCCGCCAGG GCAGGGTGGA GGCAGGGCGG
GCTTATGTGC AGCTTGGCTT GGGTTATTTG CAACAAGGTT TGACCGAACA GGCCAAGGCG
CCGTTGGGAA AGGCCCTGGC GCTGGATGAC CAGGATGTCG ACGCGCACGC CGCCCTGGCG
GTAGTGTTTC AAGCCCAAGG CGAGCCGGCG TTGGCCGAAG CACATTTTCG CAAGGCCTTG
CTGATAAGCC GCGGCGACAC GCGAATTCGC AACAATTACG GCAGTTTCCT TTATGCTCAG
GGGCGATTTG CCGAGGCCAA GCAGATGTTT CGCCTGGCCA GTGCCGATAC CCTGTATCCT
GAGCGCTCAC GCGTGTACGA GAATCTGGGC CTGACCGCCC TGAAGCTCGA ACGCCGCGAT
CAGGCGCACG CGTATCTGTT GAAAGCGTTA CAACTCAACC AGCGGCAACC AAAAGCGTTG
CTGGAAATGG CTGAGTTGTC CTACGAAAAC AGGCATTATG TGCCGGCCCG GGACTACTAC
GATCGTTTCA GCCAGTTGAG CGACCACGAC GCCCGTAGCC TGCTGCTGGG CAGCCGCCTT
GCCAGGGTGT TCGACGAGCA GGGCACACTG GCCGAATTGG GCCAGCAATT ACAACGACTT
TATCCCGGTA CGCCGGAATA TCAGCAATAC CTGTCGGAGC AACGATGA
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| Protein sequence | MPMSLRAALS ILALSLLAGC VSGGASDPLA SRQGRVEAGR AYVQLGLGYL QQGLTEQAKA
PLGKALALDD QDVDAHAALA VVFQAQGEPA LAEAHFRKAL LISRGDTRIR NNYGSFLYAQ
GRFAEAKQMF RLASADTLYP ERSRVYENLG LTALKLERRD QAHAYLLKAL QLNQRQPKAL
LEMAELSYEN RHYVPARDYY DRFSQLSDHD ARSLLLGSRL ARVFDEQGTL AELGQQLQRL
YPGTPEYQQY LSEQR
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