Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0768 |
Symbol | |
ID | 1044604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 886965 |
End bp | 888572 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637144162 |
Product | response regulator/TPR domain-containing protein |
Protein accession | NP_742929 |
Protein GI | 26987504 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAGT ACGGGCAAAA GAGCTTTCTG ATCGTCGACG ACTTTACCGA CTTTCGTACG TCGACCCGTT CCATGTTGCG CGAGTTGGGC GTGCGCGACG TGGACACCGC TGACAGCGGC GAGCAGGCGC TGCGCATGTG CGCGCAGAAG CGCTATGACT TCATCCTGCA GGACTTCCAT CTGGGTGATG GCAAGAAGAA CGGGCAGCAG GTGCTTGAAG ACCTGATCAT CGACAAGCAC ATCAGCCATG AGTGCGTGTT CATCATGGTC ACTGCCGAGA GCAGTCAGGC GATTGTTCTC AGCGCCATCG AGCACGAGCC CGATGCCTAC CTGACCAAAC CGTTCAACCG GGTTGGCCTG GCCCAGCGTG TCGAGAAACT GTTCCAGCGC AAGACGTTGC TGAAGCCGAT CCTGCAGGCG CTGGACCGCA ACCGTCCGGC CGAAGTACTG GCGGCCTGCG CCGAGCTGTG CAAGAAGGAT CCGCGCCTGG CGCCCTTGTG CTTGCGCTAC CGGGCCGATG CCCTGCGCAA CCTCAACCGT TTCGAGGAAC TGGAAAAATT CCTCAAGGCC ATCCTGGCCA GCCGTCCTCA GCCATGGGTA TACGCCGCGT TGGGCGCACT GATGCACAAG CGTGGTCAGA ATGCCCAGGC GCAGGGTGTT TACGAGCAGG CGCTCAAGGC GTTCCCGATC ATGCCAGGCC TTTACGATGG CATGGCCGAG GTGCTGGTGG CTCAGGGGGA TACCCGGCGC GCGCAGAACC TGCTTGAAGA AGCCGTGCGC CTGTCGCCTT TGTCGGTGCG TCGGCAGTCG ACGCTGGGCA AGCTGGCGCT GGAGAACGAA GACTTCGAGA GCGCATCGAA GGCGTTCCGT CATGCAGTGA ACCAGGGGCA GAGTTCGCGC TACAAGGATG CCGAAAACAA CCTTGGCCTG GTGCAGGCGT TGATGAGCAA GAATGCAGGC TTCGGCCTGG ACGCCCGTAC CCGGGTCGAG ATCAACACCA CGCTCAGCGA AGTGGCCAAG GAAAACCCCG AGGACCAAGG CCTGCAGGTG CGTGCGCGGA TGATGAAGGC TGCCAGCCTG CAGCAGGCCG GCGACCCGGA AACGGCCGGC AAGTTGACAG AACAGGCGAT TCAGCGTCTG GACAAGATGA ACCAGTTCTT CTCTGTCGAT TCGGCCCTGA CTGTCGCTGC GCAATTGCAG GCGATGGGGC AGGAAGCCGC CGCCATCGGC GTGCTGAAGA ACTGTGTGGA AAGTTATGGC GATGACCCCA AGGTCATGGA GAAAGTGGGC AAGCTGACGG ATGACCCCAG CGTGCTCAAC GCCATTACCG AAGCGGTCAC CCTCAACCGG CAGGGTGTGC GCAGTTACCA GGGAGGGCAG CTTGGCGAGG CGTTGCAACT GTTCCGAAAG GCATTGGGTT TACAGCCGAA GAACATCAGC ATCGCCCTCA ACACCGCCCA GGCGCTGCTG CGCATCGGTG GTGACAACCC TCAGCCTGCG ATCATGCAGG AGTGCCGCGA CGCCTTGACC AGCGTGGCCG GGATCCCTGC CAGCGACAAT CGCTATGACC GTTACCGCAA ACTGCACATC CGAGTGTTCG GCGCATGA
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Protein sequence | MLQYGQKSFL IVDDFTDFRT STRSMLRELG VRDVDTADSG EQALRMCAQK RYDFILQDFH LGDGKKNGQQ VLEDLIIDKH ISHECVFIMV TAESSQAIVL SAIEHEPDAY LTKPFNRVGL AQRVEKLFQR KTLLKPILQA LDRNRPAEVL AACAELCKKD PRLAPLCLRY RADALRNLNR FEELEKFLKA ILASRPQPWV YAALGALMHK RGQNAQAQGV YEQALKAFPI MPGLYDGMAE VLVAQGDTRR AQNLLEEAVR LSPLSVRRQS TLGKLALENE DFESASKAFR HAVNQGQSSR YKDAENNLGL VQALMSKNAG FGLDARTRVE INTTLSEVAK ENPEDQGLQV RARMMKAASL QQAGDPETAG KLTEQAIQRL DKMNQFFSVD SALTVAAQLQ AMGQEAAAIG VLKNCVESYG DDPKVMEKVG KLTDDPSVLN AITEAVTLNR QGVRSYQGGQ LGEALQLFRK ALGLQPKNIS IALNTAQALL RIGGDNPQPA IMQECRDALT SVAGIPASDN RYDRYRKLHI RVFGA
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