Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0660 |
Symbol | |
ID | 1044484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 767921 |
End bp | 769360 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637144052 |
Product | amino acid transporter |
Protein accession | NP_742821 |
Protein GI | 26987396 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0833] Amino acid transporters |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0232507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTGC AGACAACCAC AACTAGAAAT GCCTCGGCGC ATACCTTCAA GCAGGATATG CAAACCCGCC ACATCGTCAT GCTGGCGCTG GGCGGAGTGA TAGGCACCGG CCTGTTTCTC ACGTCGGGCT ACACCGTTAA CCAGGCCGGC CCGTTGGGCG CGGTCATCGC TTACATACTC GGCGCAATCA TGGTGTACCT GGTCATGATG TGCCTGGGCG AGCTGGCGGT ACACATGCCG GAAGTCGGCT CGTTCAGCAG TTACGCCACG CGTTACCTCG GCCCGGGCAC CGGCTACATG GTGGCCTGGA TGTACTGGCT GACCTGGACG GTGGCAATCG GCTCCGAATT CACCGCCGCG GGCATCCTGA TGGTGCGCTG GTTCCCCGAC ACGCCGGTAT GGATGTGGAG TGCGCTGTTC GGCGCTGCGG TGTTCATCAG CAATATCATT TCGGTGCGAT CGTTCGCCGA AACCGAATTC TGGTTGTCAC TGGTCAAGGT GTTGGCCGTC ATCGCCTTTC TGGTGGTGGG CGGCGGGGCC ATTCTGGGTG GCTTCGAGAT CCAGCAGGCG CACAGTGCAG GGCTGGGCAA TTTCACCCGT GAAGGGTTGT TCCCCACCGG TTTCTGGTCC ATTGCAATGA CCCTGCTGGC AGTGGCCTTC GCGTTCTCGG GTACCGAGCT GATCGGCATC GCTGCCGGCG AAACCAAAGA CCCGGAAAAG AACGTGCCCA AGGCCATTCG CACCACGGTC CTGCGCCTGG CGCTGTTCTT CATCGGCACC ATCTTTGTAC TGGCCACCTT GCTGCCGCGT GAACAGGCCG GGGTTATTGA AAGCCCGTTC GTGATGGTCT TTGCGATGAT TGGTATCCCG TATGCGGCCG ATATCATGAA CTTCGTCATC ATCACCGCGC TGCTGTCTGC CGCCAACTCC GGCCTCTACG CCGCTTCGCG CATGCTCTGG ACCCTCAGCG ACCAAGGCAA CATGCCCCGC CGTTACGCCA CGCTGTCGCG CCGCGGCACC CCCTTCAATG CGATCGTGCT GAGCATGGCT GGCGGCATGG CTTCGCTGTT GAGCAGTGTG TTTGCCCCCG ACACCATCTA CCTGGCGCTG GTGTCGATTT CAGGGTTGGC CGTGGTAGTG GTGTGGATCA GCATCGCGGC CAGCCAGATC GCATTCCGCC GTCATTACAT CGCCAGCGGC GGCAAGCTCG AGGACCTCAA GTTCCGGGTG CGTGGCTACC CGTTCGTACC ACTGGGGGCC ATTTTCTGCT GCGTACTGGC CTGCGTCGGC ATTGCCTTCG ACCCAGCTCA GCGGGTTGCC CTGTACTTCG GCTTGCCCTT CATTGCCTGG TGCTACCTGG CCTATTGGCT GACGTGCAAG TACCGCAGCC GCCGTACGGC CCCGCTGGAA ATCGTCGCCC CAGGTTCCGA GGCCGCCTGA
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Protein sequence | MSVQTTTTRN ASAHTFKQDM QTRHIVMLAL GGVIGTGLFL TSGYTVNQAG PLGAVIAYIL GAIMVYLVMM CLGELAVHMP EVGSFSSYAT RYLGPGTGYM VAWMYWLTWT VAIGSEFTAA GILMVRWFPD TPVWMWSALF GAAVFISNII SVRSFAETEF WLSLVKVLAV IAFLVVGGGA ILGGFEIQQA HSAGLGNFTR EGLFPTGFWS IAMTLLAVAF AFSGTELIGI AAGETKDPEK NVPKAIRTTV LRLALFFIGT IFVLATLLPR EQAGVIESPF VMVFAMIGIP YAADIMNFVI ITALLSAANS GLYAASRMLW TLSDQGNMPR RYATLSRRGT PFNAIVLSMA GGMASLLSSV FAPDTIYLAL VSISGLAVVV VWISIAASQI AFRRHYIASG GKLEDLKFRV RGYPFVPLGA IFCCVLACVG IAFDPAQRVA LYFGLPFIAW CYLAYWLTCK YRSRRTAPLE IVAPGSEAA
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