| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0622 |
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| Symbol | |
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| ID | 1044439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 727343 |
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| End bp | 728362 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637144009 |
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| Product | competence lipoprotein ComL, putative |
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| Protein accession | NP_742784 |
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| Protein GI | 26987359 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.258858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAGTGA AACACCTGCT GCTGATCGCC ATCCTCGGGC TTACCGCGGC CTGTTCCTCT
AATAAAGAGG TCATTGACGA GAACCTCAGC GAGGCCGAAC TGTACCAGCA GGCCCAGGCT
GATCTGGACA ACTCCAGCTA CACCAGCGCC GTGAACAAGC TCAAGGCCCT GGAGTCGCGC
TACCCGTTCG GCCGCTATGC CGATCAGGCG CAGCTCGAGC TGATCTACGC CAACTACAAG
AATTCCGAGC CCGAGGCCGC CAAGTCGGCC GCCGAGCGCT TCATCCGCCT GCACCCGCAG
CACCCGAACG TCGATTACGC CTACTACCTC AAGGGCCTGA CCTCGTTCGA CCAGGACCGT
GGCCTGCTGG CGCGCTTCCT GCCGCTGGAC ATGACCAAGC GTGACCCGGG CGCCGCCCGC
GACTCGTACA ACGAGTTCGC CCAGCTGACC AGCCGCTTCC CCAACAGCCG CTACGCGCCA
GACGCCAAGC AGCGCATGAT CTACCTGCGC AACCTGCTGG CTTCGTACGA AATCCACGTG
GCCGACTACT ACCTGAGCCG CCAGGCTTAT GTAGCGGCTG CCAACCGTGG CCGCTACGTG
GTCGAAAACT TCCAGGAAAC CCCGTCCGTC GGTGACGGCC TGGCGGTGAT GGTCGAGTCG
TACCAGAAGC TGCACCTGGA CGAACTGGCC GCCACGAGCC TGGAAACCCT CAAGCTCAAC
TACCCGGATC ACCCGAGCCT GGTCGATGGC GAGTTCCAGC CCAAGCAGAC CGAGTCTGAC
GGCCGCGGCT GGCTGTCCAA GGCCACCTTG GGCCTGATCG AAACCGAAAC CCCGCTGCCG
CCAGGCGAAA CCCGCGCCAA CCAGGACGTG GTCAAACAGT TCCAGGACGC GCGCGACGAG
ATGCCGCGAG AGCTGCTGCC TAAAGACGAG AACGGCGACC CAATCGTGCC GGAAGGCCCG
AAAGAAGCCG AGAAAGACCG TTCCTGGTTC AGCTACATGA CCTTTGGTCT GTTCGACTGA
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| Protein sequence | MRVKHLLLIA ILGLTAACSS NKEVIDENLS EAELYQQAQA DLDNSSYTSA VNKLKALESR
YPFGRYADQA QLELIYANYK NSEPEAAKSA AERFIRLHPQ HPNVDYAYYL KGLTSFDQDR
GLLARFLPLD MTKRDPGAAR DSYNEFAQLT SRFPNSRYAP DAKQRMIYLR NLLASYEIHV
ADYYLSRQAY VAAANRGRYV VENFQETPSV GDGLAVMVES YQKLHLDELA ATSLETLKLN
YPDHPSLVDG EFQPKQTESD GRGWLSKATL GLIETETPLP PGETRANQDV VKQFQDARDE
MPRELLPKDE NGDPIVPEGP KEAEKDRSWF SYMTFGLFD
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