Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0620 |
Symbol | |
ID | 1044437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 725987 |
End bp | 726751 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144007 |
Product | GntR family transcriptional regulator |
Protein accession | NP_742782 |
Protein GI | 26987357 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0506786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAC CCAAACGCAA GCGCCAGAAG CTGTCCGATG TGATCGTCGA ATCAGTCAAG CGCTCGATCG TCACCGAAGC GCTGCACCCC GGCGACCGCC TGCCTACCGA GCGGGAGCTG ATGGAGCATT TCGAATGCTC CAAGGGCACC GCCCGCGAAG CCCTCAAGGC GCTCGAAGTC GAAGGCCTGG TGAGCACCCG CACCGGCCCG ACCGGGGGCG CCTACCTGAA CGAAGTGGGC ACCGAACCAG CCAGCCGCGC ACTGCGCAAC TACCTGCACT TTCAGCACCT GGACGGCGAA CAGGTGTACC AGCTGCGCAA AGTCATCGAG GTAGAACTGG CGGTGTCGGT GATGGGCAAG CTGAGCGAAG CCGATTACGC CGCGCTGCAG GCCAACATCG ACTTCTGCAG CGCGCCGGAA GACAGCGAAG AAGGCCAGCG TGAGCAGCGC TTGGCGGAGC TTGAATTCCA CACCCTGCTG GCCGACCGCT GCCCCAACCC GTTGCTGCGT TTCATGGCGG TGTTCCTCAA CGACCTGCTG CGCGACCTGG TGGTGCTGAA AAAGGCCTAC CTGCCCAAGC GCCAGCAGTT CGCCGCCGCC AACATCGGCT ACCACAAGCA ACTGCTGACC GCCTTGCGCG CCAGCGACGA ACCCGCCGTA CGCCGGCTGA TGCACGAACA CATGTGCGAC GCCGAGCACC ACATGACCGC GCTGGAAGGC GAGGTTGCCC GTAACTTCCT GCTGGAGTTC GATCACCACC ACTGA
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Protein sequence | MLKPKRKRQK LSDVIVESVK RSIVTEALHP GDRLPTEREL MEHFECSKGT AREALKALEV EGLVSTRTGP TGGAYLNEVG TEPASRALRN YLHFQHLDGE QVYQLRKVIE VELAVSVMGK LSEADYAALQ ANIDFCSAPE DSEEGQREQR LAELEFHTLL ADRCPNPLLR FMAVFLNDLL RDLVVLKKAY LPKRQQFAAA NIGYHKQLLT ALRASDEPAV RRLMHEHMCD AEHHMTALEG EVARNFLLEF DHHH
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