| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0500 |
|---|
| Symbol | |
|---|
| ID | 1044272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 589875 |
|---|
| End bp | 590759 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637143884 |
|---|
| Product | dTDP-4-dehydrorhamnose reductase |
|---|
| Protein accession | NP_742664 |
|---|
| Protein GI | 26987239 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
|---|
| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATGC GCCTAATGCT GTTGGGTGGT GGCAATGCCC TCGGGCAAGC GCTGATTCGT
CTTGGGGCCG AGGAGGACAT CGCTTTCCTG GCACCGCGCC CGCCCGAGAA CGGCTGGGCG
CCCTCAAGCC TCACTCAGCT GCTCGATGAC CATCGCCCCG ACGCGCTGGT CAACCTGGCC
TATTACTTCG ACTGGTTCCA GGCCGAGTCG GTCAGCGAGC AGCGCCTGGC TCAACAGGAG
CGGGCGGTGG AGCGGTTGGC AGAGCTGTGC CAGCACCATC AGATCACCTT GGTGCAGCCC
TCCAGCTACC GTGTGTTCGA TGGTTCGCGG GCCACGGCCT ATAGCGAAAA GGACGAGCCA
GTGCCGCTGG GCTTGCGTGG CCAGGCCCTA TGGCGCATCG AGCAGAGCGT GCGTGCGGCC
TGCCCGCAGC ATGTGTTGCT GCGCTTTGGC TGGTTGCTGG ACGAGAGCAT CGATGGCGCA
TTGGGCCGCT TCCTGACCCG TGCCGAGCAA CCACAGGAGC TGCTGCTGGC CGATGATCGA
CGTGGCAACC CGACGCCGGT CGATGATGCC GCCCGAGTGA TCCTGTCGGT GCTCAAGCAA
CTGGATTGCA ATGCGCCGCT GTGGGGCACC TACCATTACG CCGGCAATGA GGCGACCACG
CCGCTGGCGC TGGGCCAGGC GATCCTCGCC GAGGCCGGCC AATACCGCCA GCTGGCCGTT
CAGGCCCCCA CGCCGCAGGC CCATGCCGCG CGCCCGGATG CCAGCGAAGA GCCACAGCAC
GCGGTACTGG CCTGCAAGAA AATCCTTCAT ACCTTCGGTA TCAAGCCGCG TGCCTGGCGC
GCTGGCTTGC CACCTCTACT GGACCGGTTC TACCGCCATG GCTGA
|
|---|
| Protein sequence | MRMRLMLLGG GNALGQALIR LGAEEDIAFL APRPPENGWA PSSLTQLLDD HRPDALVNLA
YYFDWFQAES VSEQRLAQQE RAVERLAELC QHHQITLVQP SSYRVFDGSR ATAYSEKDEP
VPLGLRGQAL WRIEQSVRAA CPQHVLLRFG WLLDESIDGA LGRFLTRAEQ PQELLLADDR
RGNPTPVDDA ARVILSVLKQ LDCNAPLWGT YHYAGNEATT PLALGQAILA EAGQYRQLAV
QAPTPQAHAA RPDASEEPQH AVLACKKILH TFGIKPRAWR AGLPPLLDRF YRHG
|
|---|
| |