Gene PP_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0487 
Symbol 
ID1044257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp573234 
End bp574031 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content59% 
IMG OID637143873 
Producthypothetical protein 
Protein accessionNP_742653 
Protein GI26987228 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0808149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCG CTATGGAAAT GTTGGGTTCT TACTGGGCGG AGCACTGGTT GCTGGCAGTC 
CTCATACTTG GCGCGATCGC CTTCGTTGCG GGCTTCGTCG ACAGCATTGC CGGTGGTGGA
GGTTTGTTTC TGGTGCCGGG TTTTCTGCTG GTGGGCATGC CGCCCCAGGT GGCACTGGGC
CAGGAAAAAC TGGTCAGTAC CCTCGGCACG CTGGCGGCTA TCCGCAACTT CCTGGCCAAC
AGCAAGATGG TCTGGCAGGT AGCGTTGGTC GGGGTGCCGT TTTCGCTGCT AGGCGCCTAC
CTGGGGGCTC ACCTGATCGT GTCGATCTCG CAGGAAACTG TGGGCAAGAT CATCCTGGCA
CTGATCCCGC TCGGTATTCT CATTTTCCTT ACCCCCAAGG ACCGCCCGGT CGAGGAGCGC
GAACTGTCAT CGCGCATGCT GTTCACCGTG GTCCCGCTGA CCTGCCTGGC CATTGGCTTC
TATGACGGCT TCTTCGGCCC CGGTACCGGC AGCATGTTCA TCATCGCTTT CCATTACCTG
CTGCGCATGG ACCTGGTCTC CAGTTCGGCC AACTCCAAAA CCTTCAACTT CGCTTCCAAC
ATCGGTGCTT TGGTGGCGTT CGTCAGCGCA GGCAAGGTCG TCTACCTGCT GGCATTGCCA
CTTGTGGCCT GCAACATCCT CGGTAACCAC CTGGGCAGTT CCCTGGCCTT GCGTAAAGGC
AACGACGTGG TGCGCAAGGC GTTGGTGTTC TCGATGCTCT GCCTGTTCAC CAGCCTGGGC
GTGAAGTACC TGACCTGA
 
Protein sequence
MDIAMEMLGS YWAEHWLLAV LILGAIAFVA GFVDSIAGGG GLFLVPGFLL VGMPPQVALG 
QEKLVSTLGT LAAIRNFLAN SKMVWQVALV GVPFSLLGAY LGAHLIVSIS QETVGKIILA
LIPLGILIFL TPKDRPVEER ELSSRMLFTV VPLTCLAIGF YDGFFGPGTG SMFIIAFHYL
LRMDLVSSSA NSKTFNFASN IGALVAFVSA GKVVYLLALP LVACNILGNH LGSSLALRKG
NDVVRKALVF SMLCLFTSLG VKYLT