Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0487 |
Symbol | |
ID | 1044257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 573234 |
End bp | 574031 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637143873 |
Product | hypothetical protein |
Protein accession | NP_742653 |
Protein GI | 26987228 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0808149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCG CTATGGAAAT GTTGGGTTCT TACTGGGCGG AGCACTGGTT GCTGGCAGTC CTCATACTTG GCGCGATCGC CTTCGTTGCG GGCTTCGTCG ACAGCATTGC CGGTGGTGGA GGTTTGTTTC TGGTGCCGGG TTTTCTGCTG GTGGGCATGC CGCCCCAGGT GGCACTGGGC CAGGAAAAAC TGGTCAGTAC CCTCGGCACG CTGGCGGCTA TCCGCAACTT CCTGGCCAAC AGCAAGATGG TCTGGCAGGT AGCGTTGGTC GGGGTGCCGT TTTCGCTGCT AGGCGCCTAC CTGGGGGCTC ACCTGATCGT GTCGATCTCG CAGGAAACTG TGGGCAAGAT CATCCTGGCA CTGATCCCGC TCGGTATTCT CATTTTCCTT ACCCCCAAGG ACCGCCCGGT CGAGGAGCGC GAACTGTCAT CGCGCATGCT GTTCACCGTG GTCCCGCTGA CCTGCCTGGC CATTGGCTTC TATGACGGCT TCTTCGGCCC CGGTACCGGC AGCATGTTCA TCATCGCTTT CCATTACCTG CTGCGCATGG ACCTGGTCTC CAGTTCGGCC AACTCCAAAA CCTTCAACTT CGCTTCCAAC ATCGGTGCTT TGGTGGCGTT CGTCAGCGCA GGCAAGGTCG TCTACCTGCT GGCATTGCCA CTTGTGGCCT GCAACATCCT CGGTAACCAC CTGGGCAGTT CCCTGGCCTT GCGTAAAGGC AACGACGTGG TGCGCAAGGC GTTGGTGTTC TCGATGCTCT GCCTGTTCAC CAGCCTGGGC GTGAAGTACC TGACCTGA
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Protein sequence | MDIAMEMLGS YWAEHWLLAV LILGAIAFVA GFVDSIAGGG GLFLVPGFLL VGMPPQVALG QEKLVSTLGT LAAIRNFLAN SKMVWQVALV GVPFSLLGAY LGAHLIVSIS QETVGKIILA LIPLGILIFL TPKDRPVEER ELSSRMLFTV VPLTCLAIGF YDGFFGPGTG SMFIIAFHYL LRMDLVSSSA NSKTFNFASN IGALVAFVSA GKVVYLLALP LVACNILGNH LGSSLALRKG NDVVRKALVF SMLCLFTSLG VKYLT
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