Gene PP_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0428 
Symbol 
ID1044157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp515805 
End bp516143 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content56% 
IMG OID637143807 
Producthistidine triad (HIT) protein 
Protein accessionNP_742594 
Protein GI26987169 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.813701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGATC TATTCCTCAA AATCATCAAC CGGGAAATCC CGGCAGATAT CATCTATGAA 
GACGACCAGA TCCTGGCCTT CAAGGACATT GCACCCGCGG CACCGGTACA TTTTCTGGTC
ATCCCGAAAA AGCACATTCG CACCCTCAAT GACCTGACCG AAGAAGACAA GGCCCTGGCT
GGCCACATCC TGTTCACCGC CCAGCGCCTG GCTGTCGAAC AAGGCTGCGA GGAAGGTTTC
CGTGTGGTCA TGAACTGCAA CCCCAAAGGC GGCCAGACCG TCTACCACAT CCATATGCAC
GTGCTTGGCC AGCGCCAGAT GAACTGGCCT CCGGGCTGA
 
Protein sequence
MDDLFLKIIN REIPADIIYE DDQILAFKDI APAAPVHFLV IPKKHIRTLN DLTEEDKALA 
GHILFTAQRL AVEQGCEEGF RVVMNCNPKG GQTVYHIHMH VLGQRQMNWP PG