Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0378 |
Symbol | pqqC |
ID | 1044088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 458023 |
End bp | 458778 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637143757 |
Product | pyrroloquinoline quinone biosynthesis protein PqqC |
Protein accession | NP_742545 |
Protein GI | 26987120 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
TIGRFAM ID | [TIGR02111] coenzyme PQQ biosynthesis protein C |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG CACTGCCAAT GTCCCCTGCC GAGTTCGAGC AGGCCCTGCG CGCCAAGGGC GCCTATTACC ACATCCATCA CCCGTACCAC GTGGCGATGT ACCAGGGGCG CGCCACCCGC GAGCAGATCC AGGGCTGGGT GGCCAACCGC TTCTACTACC AGGTCAACAT CCCGATGAAG GATGCCGCGA TCCTGGCCAA CTGCCCGGAC CGCGAAGTGC GCCGCGAGTG GATCCAGCGC CTGCTCGACC ACGACGGTGC GCCCGGCGAG GATGGCGGCA TCGAAGCCTG GCTGCGCCTG GGCCAGGCTG TCGGGCTGGA CCCGGACCAA TTGCGCTCGC AAGAACTGGT ATTGCCTGGC GTGCGCTTTG CCGTGGACGC CTACGTCAAC TTTGCCCGCC GCGCCAGCTG GCAGGAAGCC GCCAGCAGTT CGCTGACCGA GCTGTTCGCC CCGCAAATCC ACCAGTCACG CCTGGACAGC TGGCCGCAGC ACTACCCGTG GATCGACCCC GCCGGCTATG AGTATTTCCG TACCCGCCTG GGCCAGGCGC GACGCGATGT GGAACACGGC CTGGCGATTA CCCTGCAGCA CTACACCACC CGTGCGGGCC AGGAGCGTAT GCTGGAGATA CTGCAGTTCA AGCTGGATAT CCTCTGGAGT ATGCTCGATG CCATGAGCAT GGCCTACGAA CTGAACCGCC CGCCCTATCA CTCCGTCACC CAGGAACGGG TGTGGCACAA GGGAATCACC CTATGA
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Protein sequence | MSDALPMSPA EFEQALRAKG AYYHIHHPYH VAMYQGRATR EQIQGWVANR FYYQVNIPMK DAAILANCPD REVRREWIQR LLDHDGAPGE DGGIEAWLRL GQAVGLDPDQ LRSQELVLPG VRFAVDAYVN FARRASWQEA ASSSLTELFA PQIHQSRLDS WPQHYPWIDP AGYEYFRTRL GQARRDVEHG LAITLQHYTT RAGQERMLEI LQFKLDILWS MLDAMSMAYE LNRPPYHSVT QERVWHKGIT L
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