Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0368 |
Symbol | |
ID | 1044076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 445314 |
End bp | 447119 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637143747 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | NP_742535 |
Protein GI | 26987110 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.335716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGACT ACAAAGCCCC CTTGCGTGAT ATCCGCTTCG TTCGCGACGA GCTGCTTGGC TATGAGGCGC ACTATCAGAG CCTGCCGGGC TGCCAGGACG CCACGCCCGA CATGGTCGAC GCGATCCTTG AAGAAGGCGC GAAGTTCTGT GAGCAGGTGT TGTCGCCGCT GAACCGCGTG GGTGACCAGG AAGGCTGCAC CTGGAGCGAA TCGGGGGTGA AAACCCCAAC CGGCTTTAAA GAAGCCTACC AGCAGTTCGT CGAAGGCGGC TGGCCGAGCC TGGCACATGA CGTCGAACAT GGCGGCCAAG GCCTGCCAGA GTCGCTGGGC CTGGCCCTGA GCGAAATGGT CGGTGGCTCG AACTGGTCGT GGGGTATGTA CCCAGGCCTG TCGCATGGCG CGATGAACAC TATTTCTGCG CATGGCACTG CCGAGCAGCA GCACACCTAC CTGACCAAGC TGGTGTCCGG CGAGTGGACC GGCACCATGT GCCTGACCGA ACCGCACTGC GGCACCGACC TGGGCATGCT GCGCACCAAG GCCGAGCCAC AGGCCGACGG CAGCTACAAA GTGTCGGGCA CCAAGATCTT CATTTCGGCC GGTGAGCACG ACATGGCCGA CAACATCGTC CATATCGTCC TGGCCCGCCT GCCGGACGCA CCGGCCGGTA CCAAGGGGAT TTCGCTGTTC ATCGTGCCGA AGTTCCTGCC CAACGCCGAG GGCGGCGTGG GCGAGCGCAA CGGCGTGAGC TGCGGCTCGA TCGAACACAA GATGGGCATC CACGGTAACG CTACCTGCGT CATGAACTTC GATGCTGCCA CCGGCTACCT GATCGGCCCA GCCAACAAAG GCCTGAACTG CATGTTCACC TTCATGAACA CTGCTCGTCT GGGGACCGCG CTGCAAGGCC TGGCCCACGC CGAGGTGGCG TTCCAGGGTG GCCTGAAGTA CGCCCGTGAG CGCCTGCAGA TGCGTTCCCT GACCGGCCCG AAAGCACCGG ACAAGGCCGC TGACCCGATC ATCGTCCACC CGGACGTGCG TCGCATGCTG CTGACCATGA AGGCCTTCGC CGAAGGCAAC CGCGCGATGG TTTACTTCAC CGCCAAGCAG GTGGACATCG TCAAGTACAG CCAGGACGAA GAAGAGCGCA AGAAGGCTGA CGCCCTGCTG GCGTTCCTGA CCCCGATCGC CAAGGCATTC ATGACCGAAG TCGGTTTCGA AGCCGCCAAC CACGGCGTAC AGATCTACGG CGGCCATGGC TTCATCGCCG AATGGGGCAT GGAGCAGAAC GTGCGCGACA GCCGTATCTC CATGCTGTAC GAAGGCACTA CCGGTATTCA GGCCCTCGAC CTGCTCGGTC GCAAAGTGCT GATGACTCAG GGCGAAGCAC TGAAGGGCTT CACCAAGATC GTGCACAAGT TCTGCCAGGC GCAGGAAGGT AACGAAGCGG TCAAGGAGTT CGTTGAACCG CTGGCGGCCA TCAACAAGGA GTGGGGCGAG CTGACCATGA AAGTGGGCAT GGCTGCCATG AAGGACCGTG AAGAAGTGGG TGCGGCTTCG GTCGATTACC TGATGTACTC CGGCTATGCC TGCCTGGCCT ACTTCTGGGC CGACATCGCC CGCCTGGCCG CCGAGAAACT GGCAGCCGGC ACCAGCGAGG AGGCGTTCTA CACCGCCAAG CTGCAGACTG CGCGCTTCTA CTTCCAGCGC ATCCTGCCAC GTACCCGTAC CCATGTGGCG ACCATGCTGT CGGGCGCCAA CAACCTGATG GCGATGGACG AAGAGCACTT CGGCCTGTCG TACTGA
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Protein sequence | MPDYKAPLRD IRFVRDELLG YEAHYQSLPG CQDATPDMVD AILEEGAKFC EQVLSPLNRV GDQEGCTWSE SGVKTPTGFK EAYQQFVEGG WPSLAHDVEH GGQGLPESLG LALSEMVGGS NWSWGMYPGL SHGAMNTISA HGTAEQQHTY LTKLVSGEWT GTMCLTEPHC GTDLGMLRTK AEPQADGSYK VSGTKIFISA GEHDMADNIV HIVLARLPDA PAGTKGISLF IVPKFLPNAE GGVGERNGVS CGSIEHKMGI HGNATCVMNF DAATGYLIGP ANKGLNCMFT FMNTARLGTA LQGLAHAEVA FQGGLKYARE RLQMRSLTGP KAPDKAADPI IVHPDVRRML LTMKAFAEGN RAMVYFTAKQ VDIVKYSQDE EERKKADALL AFLTPIAKAF MTEVGFEAAN HGVQIYGGHG FIAEWGMEQN VRDSRISMLY EGTTGIQALD LLGRKVLMTQ GEALKGFTKI VHKFCQAQEG NEAVKEFVEP LAAINKEWGE LTMKVGMAAM KDREEVGAAS VDYLMYSGYA CLAYFWADIA RLAAEKLAAG TSEEAFYTAK LQTARFYFQR ILPRTRTHVA TMLSGANNLM AMDEEHFGLS Y
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