| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0297 |
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| Symbol | sda-1 |
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| ID | 1043986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 356654 |
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| End bp | 358030 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637143676 |
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| Product | L-serine dehydratase, iron-sulfur-dependent, single chain form |
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| Protein accession | NP_742464 |
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| Protein GI | 26987039 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000246036 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCATCA GCGTGTTCGA CCTGTTCAAG ATCGGTGTCG GGCCCTCCAG CTCCCACACC
GTCGGCCCCA TGCGTGCTGG CGCCCTGTTC GTTCAGGGCC TGCGCGAACG CGGTGAGCTG
GAGCGTGTAA AACGGATCGA AGTGCGCCTG TATGGCTCGC TGTCAGCCAC CGGTATCGGC
CATGGCACCG ACAACGCCAC CATCATGGGC CTGATGGGCG AGTGGCCTGA CGCCATTGAC
CCGACCCAGA TCGTGCCGCG TATCGCCGAC CTGCGCGAAA CCAACACCCT GCAGCTGGAT
AGCCGCTTGC CCATCGAGTT TGTCTGGGCC CGCGACATGC TGCTGCTGGA CGAGAACCTG
CCCTATCACC CCAACGCCAT GACCCTAATT GCCGAAGGCG AGCAGGGCGA GTTGCACCGC
GACACCTATT ACTCGGTGGG CGGCGGCTTT GTGGTCGATG CAGCCCAAGC CGCCAGCGGT
GTGCTGGATG CTGACCAGAC AGTGCTGCCG TACGACTTCA ACAGCGCCGC CGAACTGCTG
CGCCTGTGCA AGCAAAACGA CCTCAGCGTG TCGCAATTGA TGATGGCCAA CGAGAAGGTC
TGGCGCAGCG AGGAAGACAT CCGCGCTGGC CTGCACAAGC TCTGGGAAGC CATGCAGGAA
TGCGTCAACA ACGGCCTCAA GTACGAGGGC ACGCTACCCG GCGGGCTGAA CGTGCGCCGC
CGTGCCGCCA AGCTGCACCG CAGCCTGCAG GAAATCGGCA AGCCCAACGT GATCGGCTCG
ACCATGAGTG CCATGGAATG GGTCAACCTG TTCGCCTTGG CGGTCAATGA AGAAAACGCC
GCCGGTGGGC GCATGGTGAC CGCGCCTACC AACGGCGCGG CGGGCATCAT CCCGGCAGTG
CTGCATTACT ACATGCGCTT CAGCGATGCG GTGGATGAAT CCAGCGTTGT CGATTACTTC
CTGGCTGCCG CCGCTGTGGG CATCCTGTGC AAGAAGAACG CTTCGATCTC TGGTGCCGAA
GTGGGCTGCC AGGGGGAAGT CGGCTCGGCC TGCGCGATGG CCGCAGCGGG GCTTGCCGAA
GTGCTCGGCG CCACCCCGCC ACAGGTTGAG AACGCCGCTG AAATTGCCCT GGAACACAAC
CTTGGCCTGA CCTGCGACCC GGTGGGTGGG TTGGTGCAAG TGCCCTGCAT CGAGCGCAAC
GCGATTGCTG CGGTGAAGGC CATCAACGCG GTGCAGATGG CCTTGCGCGG CGATGGTGAG
CACTTCATTT CCCTCGACCA GGTAATCCGC ACCATGCGCG ATACCGGCGC CGATATGCAC
GACAAGTACA AAGAGACCTC GCGCGGCGGC CTGGCGGTCA GCGCTATCGA GTGCTGA
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| Protein sequence | MAISVFDLFK IGVGPSSSHT VGPMRAGALF VQGLRERGEL ERVKRIEVRL YGSLSATGIG
HGTDNATIMG LMGEWPDAID PTQIVPRIAD LRETNTLQLD SRLPIEFVWA RDMLLLDENL
PYHPNAMTLI AEGEQGELHR DTYYSVGGGF VVDAAQAASG VLDADQTVLP YDFNSAAELL
RLCKQNDLSV SQLMMANEKV WRSEEDIRAG LHKLWEAMQE CVNNGLKYEG TLPGGLNVRR
RAAKLHRSLQ EIGKPNVIGS TMSAMEWVNL FALAVNEENA AGGRMVTAPT NGAAGIIPAV
LHYYMRFSDA VDESSVVDYF LAAAAVGILC KKNASISGAE VGCQGEVGSA CAMAAAGLAE
VLGATPPQVE NAAEIALEHN LGLTCDPVGG LVQVPCIERN AIAAVKAINA VQMALRGDGE
HFISLDQVIR TMRDTGADMH DKYKETSRGG LAVSAIEC
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