Gene PP_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0250 
SymbolhslR 
ID1043825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp304740 
End bp305141 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content64% 
IMG OID637143628 
ProductRNA-binding S4 domain protein 
Protein accessionNP_742418 
Protein GI26986993 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0157296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAA AAGCCGAAGA CGACGACAAG GTTCGCCTGG ACAAATGGCT GTGGGCGGCG 
CGCTTCTACA AGACGCGAGC GCTGGCCAAG GCGGCGATCG AGAGTGGCAA GGTGCATTGC
CGGGGCGAGC GATGCAAGCC GGGCAAGGAA CCGCGGGTGG GCGACGAGTT CGTGCTGCGT
ACCGGCTTCG ATGAGCGCAC GGTGGTGGTG AAGGCGCTGT CGGTGGTGCG TCGTGGTGCC
CCAGAGGCGC AGGCGTTGTA CGAGGAAACC GAAGAAAGTG TGCGTCGCCG TGAACAGGCG
GCTGAAATGC GTAAGGCCGG GGCCATGGGC GTGACCACCG ATGGCCGGCC GACCAAGAAG
CAGCGGCGGC AGATTCACCA GCTGCATGGA AGTTACGATT GA
 
Protein sequence
MAQKAEDDDK VRLDKWLWAA RFYKTRALAK AAIESGKVHC RGERCKPGKE PRVGDEFVLR 
TGFDERTVVV KALSVVRRGA PEAQALYEET EESVRRREQA AEMRKAGAMG VTTDGRPTKK
QRRQIHQLHG SYD