Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0113 |
Symbol | |
ID | 1043604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 118148 |
End bp | 118819 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637143485 |
Product | ABC transporter, permease protein |
Protein accession | NP_742283 |
Protein GI | 26986858 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2011] ABC-type metal ion transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.975917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGCCC TGAATTTCTT TGCCAACGTC GACTGGGCCG AAATCTGGCT GGCCACCGTC GATACCATGA TCATGCTGTT CGGCTCGCTG TTCTTCACCG TGCTACTGGG CCTGCCACTG GGCGTGCTGC TGTTCCTCTG CGGGCCAAAG CAGATGTTCG AACAGAAGGG CGTCTATGCG CTGCTGTCGC TGGTGGTCAA CATCCTGCGC TCGCTGCCAT TCATCATTTT GCTGATCGTG ATGATCCCGT TCACCGTGCT GATCACCGGT ACCTCGCTGG GCGTTGCAGG CGCCATCCCG CCGCTGGTAG TGGGTGCCAC GCCGTTCTTT GCGCGCCTGG TTGAAACCGC CTTGCGTGAA GTGGACCGCG GCATCATCGA AGCCACCCAG TCGATGGGCG CCACCACCCG CCAGATCATC ACCAGTGCGC TGCTGCCGGA AGCCCGTCCG GGCATCTTCG CGGCCATAAC GGTAACCGCC ATCACCCTGG TTTCTTACAC TGCCATGGCC GGTGTGGTGG GTGCCGGTGG CCTTGGTGAC CTGGCTATCC GCTTCGGTTA CCAGCGTTTC CAGACCGATG TGATGGTAGT GACCGTGGTA CTGCTGCTGG TACTGGTTCA AGTCCTGCAG AGCGTGGGCG ACAAACTGGT CGTGCATTTT TCCCGTAAAT AA
|
Protein sequence | MDALNFFANV DWAEIWLATV DTMIMLFGSL FFTVLLGLPL GVLLFLCGPK QMFEQKGVYA LLSLVVNILR SLPFIILLIV MIPFTVLITG TSLGVAGAIP PLVVGATPFF ARLVETALRE VDRGIIEATQ SMGATTRQII TSALLPEARP GIFAAITVTA ITLVSYTAMA GVVGAGGLGD LAIRFGYQRF QTDVMVVTVV LLLVLVQVLQ SVGDKLVVHF SRK
|
| |