Gene PP_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0113 
Symbol 
ID1043604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp118148 
End bp118819 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content60% 
IMG OID637143485 
ProductABC transporter, permease protein 
Protein accessionNP_742283 
Protein GI26986858 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.975917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCC TGAATTTCTT TGCCAACGTC GACTGGGCCG AAATCTGGCT GGCCACCGTC 
GATACCATGA TCATGCTGTT CGGCTCGCTG TTCTTCACCG TGCTACTGGG CCTGCCACTG
GGCGTGCTGC TGTTCCTCTG CGGGCCAAAG CAGATGTTCG AACAGAAGGG CGTCTATGCG
CTGCTGTCGC TGGTGGTCAA CATCCTGCGC TCGCTGCCAT TCATCATTTT GCTGATCGTG
ATGATCCCGT TCACCGTGCT GATCACCGGT ACCTCGCTGG GCGTTGCAGG CGCCATCCCG
CCGCTGGTAG TGGGTGCCAC GCCGTTCTTT GCGCGCCTGG TTGAAACCGC CTTGCGTGAA
GTGGACCGCG GCATCATCGA AGCCACCCAG TCGATGGGCG CCACCACCCG CCAGATCATC
ACCAGTGCGC TGCTGCCGGA AGCCCGTCCG GGCATCTTCG CGGCCATAAC GGTAACCGCC
ATCACCCTGG TTTCTTACAC TGCCATGGCC GGTGTGGTGG GTGCCGGTGG CCTTGGTGAC
CTGGCTATCC GCTTCGGTTA CCAGCGTTTC CAGACCGATG TGATGGTAGT GACCGTGGTA
CTGCTGCTGG TACTGGTTCA AGTCCTGCAG AGCGTGGGCG ACAAACTGGT CGTGCATTTT
TCCCGTAAAT AA
 
Protein sequence
MDALNFFANV DWAEIWLATV DTMIMLFGSL FFTVLLGLPL GVLLFLCGPK QMFEQKGVYA 
LLSLVVNILR SLPFIILLIV MIPFTVLITG TSLGVAGAIP PLVVGATPFF ARLVETALRE
VDRGIIEATQ SMGATTRQII TSALLPEARP GIFAAITVTA ITLVSYTAMA GVVGAGGLGD
LAIRFGYQRF QTDVMVVTVV LLLVLVQVLQ SVGDKLVVHF SRK