| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0083 |
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| Symbol | trpB |
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| ID | 1043564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 92375 |
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| End bp | 93592 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637143455 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | NP_742253 |
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| Protein GI | 26986828 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0017562 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCAGT CCCAATACCG CCCCGGCCCC GACGCCAATG GCCTGTTCGG CTCGTTCGGC
GGCCGCTACG TGGCCGAAAC CCTGATGCCA CTGGTGCTGG ACCTGGCCCG CGAATACGAA
GCGGCCAAGG CAGACCCCAA GTTTCTTGAA GAGCTGGCTT ACTTTCAGCG CGACTACATC
GGCCGCCCCA ACCCGCTGTA CTTCGCCGAG CGCCTGACCG AGCATTGCGG CGGAGCGAAG
ATTTTCTTCA AGCGTGAAGA GCTCAACCAT ACCGGCGCGC ACAAGGTGAA CAACTGCATC
GGCCAAGTGC TGCTGGCCAA GCGCATGGGC AAAAAGCGCC TGATCGCCGA AACCGGCGCC
GGCATGCACG GTGTCGCCAC CGCCACTGTC GCCGCGCGCT TCGGCCTGCC TTGCGTGATC
TACATGGGTG CCACCGACAT CGAGCGCCAG CAGGCGAACG TGTTCCGCAT GAAGCTGCTG
GGCGCCGAGA TCGTGCCAGT TACCGCCGGC ACCGGTACCC TGAAAGACGC CATGAACGAA
GCCCTGCGTG ACTGGGTTAC CAACGTCGAA GACACCTTCT ACCTGATCGG CACCGTGGCT
GGCCCACACC CGTACCCCGC CATGGTGCGC GACTTCCAGT CGATCATCGG CAAAGAGACC
CGTGCCCAGT TGCAAGAGAA GGAAGGCCGT CTGCCAGACA GCCTGGTTGC CTGCGTCGGC
GGCGGCTCCA ATGCCATGGG CCTGTTTCAT GAGTTCCTCG AAGAGCCGAG CGTGCAGATC
ATCGGCGTTG AAGCCGGTGG CCACGGCGTA CACACCGACA AGCATGCCGC CAGCCTGAAC
GGCGGCGTAC CGGGCGTGTT GCACGGCAAC CGCACCTACC TGCTGCAGGA CCAAGACGGC
CAGATCACCG ATGCCCACTC GATTTCCGCA GGCCTGGACT ACCCGGGCAT CGGCCCGGAG
CACGCCTATC TGCATGAGGT GAAGCGCGTC GAGTACGTCA GCATCACCGA TGACGAAGCA
TTGGATGCGT TCCACGCAAC CTGCCGTCTG GAAGGCATCA TTCCAGCCCT GGAAAGCTCC
CACGCCTTGG CCGAAGCGAT CAAGCGCGCA CCGAAGCTGC CCAAGGACCA CCTGATGGTC
GTGTGCCTGT CGGGCCGCGG CGACAAAGAT ATGCAAACCG TCATGAACCA CATGGCCGCC
CAGGAGAAAC AGGCATGA
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| Protein sequence | MTQSQYRPGP DANGLFGSFG GRYVAETLMP LVLDLAREYE AAKADPKFLE ELAYFQRDYI
GRPNPLYFAE RLTEHCGGAK IFFKREELNH TGAHKVNNCI GQVLLAKRMG KKRLIAETGA
GMHGVATATV AARFGLPCVI YMGATDIERQ QANVFRMKLL GAEIVPVTAG TGTLKDAMNE
ALRDWVTNVE DTFYLIGTVA GPHPYPAMVR DFQSIIGKET RAQLQEKEGR LPDSLVACVG
GGSNAMGLFH EFLEEPSVQI IGVEAGGHGV HTDKHAASLN GGVPGVLHGN RTYLLQDQDG
QITDAHSISA GLDYPGIGPE HAYLHEVKRV EYVSITDDEA LDAFHATCRL EGIIPALESS
HALAEAIKRA PKLPKDHLMV VCLSGRGDKD MQTVMNHMAA QEKQA
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