Gene PMT9312_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1796 
Symbol 
ID3766623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1691647 
End bp1692729 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content27% 
IMG OID637798342 
ProductD-amino acid oxidase 
Protein accessionYP_398293 
Protein GI78780181 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.229908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCT TAAAAGAAAA TTTTCAAAAA GCACACATAG TCATTATTGG ATCTGGGATT 
ATTGGAAAAT TTAACGCCTT AGAATTATCA GAATTAGGTT TCCAGATAAC AATAATAGAT
CCAACTCAAC TCCAAAATAG TAGCAATGCA GCTTTAGGCT TGCTAATGGG TAATATGTAT
CAAAAAAGAA GAGGTAGAAG TTGGGATCTC AGAAAACAAA GCATTGAATT ATGGCCACAA
TGGATTAAAT TCTTGCAAAA ATTTAATTAT AAATTAAATA TCGAAAAACC ATTAATACAA
CTAACGACTA ATGAAGAAAA GTTCAAAAAA TTAGAGAAAT TTATTTATGA AAATAATGAT
CAAAACTTAC GAATTTTAGA AAGAGACTCA ATATTAATCA ATAATATAAA TAAAGCCTTC
AAAACAAACA ATATAAAAGG GATAATTTCC TTCAAAGATG GAAGAATAAA TGCTTTGTCT
TTACTTCAAA CATTAGATAA ATGTTTAAAA CATAAAAAAG TAAATTATTT ACAAAGAGAA
ATAATAAAAA TAAGAAAATC AAACAATCAA TGGATTTCTA CAACAAGGAA TAATGAAAAC
ATCAAATCTG ACATGCTTAT TTTGTGTAAT TCACTAAAAG CGATTGATTT AATAGATAAC
CTATCTCACA ACATCAAATT AAAACCTGTT TTAGGTCAAG CTATGGAAAT TGAGATAAAT
GATGCAGAAG TTGATTTATT ATCGCTGCCA AAACAATTCA ATATTAATGG TAAAAATATA
ATTCCAAAAT CAAAAAATAA GCTAATTATT GGATCAACTG ACGAATATAG TACTAAGCCA
GACGAAAATA CATTCGAAAA ACTCACAAAT TTTCTCGATA AAAAACCTAA TTGGCTTGTA
CAAGGAAATA TTATAAGAAA ATGGTCAGGG ATTAGGTCAA GACCTGATGG TGAGCCTTCA
CCAATAATTA AAAACTTAGA AGATGGACTA ATTATATGTA CAGGTTTTTA TAAAAATGGA
ATTTTACTTG CTCCAGCTTG TTCTAAATGG GTTGCTAATG AAATTAAAAA TTACCTTTCT
TAA
 
Protein sequence
MKSLKENFQK AHIVIIGSGI IGKFNALELS ELGFQITIID PTQLQNSSNA ALGLLMGNMY 
QKRRGRSWDL RKQSIELWPQ WIKFLQKFNY KLNIEKPLIQ LTTNEEKFKK LEKFIYENND
QNLRILERDS ILINNINKAF KTNNIKGIIS FKDGRINALS LLQTLDKCLK HKKVNYLQRE
IIKIRKSNNQ WISTTRNNEN IKSDMLILCN SLKAIDLIDN LSHNIKLKPV LGQAMEIEIN
DAEVDLLSLP KQFNINGKNI IPKSKNKLII GSTDEYSTKP DENTFEKLTN FLDKKPNWLV
QGNIIRKWSG IRSRPDGEPS PIIKNLEDGL IICTGFYKNG ILLAPACSKW VANEIKNYLS