Gene PMT9312_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1643 
SymbolrplP 
ID3766463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1534422 
End bp1534904 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content39% 
IMG OID637798183 
Product50S ribosomal protein L16 
Protein accessionYP_398140 
Protein GI78780028 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0197] Ribosomal protein L16/L10E 
TIGRFAM ID[TIGR01164] ribosomal protein L16, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAGTC CAAAACGTAC TAAATTTCGT AAACAACATA GAGGCAGAAT GAGGGGAGTA 
GCCTCTAAAG GCAATACGAT CGCTTTCGGC CAATTTGCTC TCCAAGCTCA AGACTGTGGT
TGGGTCACTG CTCGTCAAAT TGAAGCAAGT AGACGAGCAA TGACAAGATA TATTAAGCGT
GGAGGTCAAA TCTGGATAAG AATATTTCCT GATAAACCTG TCACCATGAG ACCTGCTGAA
ACTAGAATGG GTTCTGGTAA AGGTAATCCC GAGTTTTGGG TTGCAGTTGT AAAACCAGGG
AGAATACTTT TTGAAATGGG TGGAGATGAT ATTACAGAGG AAATTGCAAA AGAAGCTATG
CGTCTAGCTC AATACAAACT TCCTGTAAAG ACAAAATTTA TCTCGAGTGA TAAAAATCTA
GAAGTTTCTT CTCAAGAAAA CACAAAAAAT AATAAAGAAT CTCAAGAGGA GGTTAAACAG
TGA
 
Protein sequence
MLSPKRTKFR KQHRGRMRGV ASKGNTIAFG QFALQAQDCG WVTARQIEAS RRAMTRYIKR 
GGQIWIRIFP DKPVTMRPAE TRMGSGKGNP EFWVAVVKPG RILFEMGGDD ITEEIAKEAM
RLAQYKLPVK TKFISSDKNL EVSSQENTKN NKESQEEVKQ