Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1643 |
Symbol | rplP |
ID | 3766463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1534422 |
End bp | 1534904 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637798183 |
Product | 50S ribosomal protein L16 |
Protein accession | YP_398140 |
Protein GI | 78780028 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0197] Ribosomal protein L16/L10E |
TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAGTC CAAAACGTAC TAAATTTCGT AAACAACATA GAGGCAGAAT GAGGGGAGTA GCCTCTAAAG GCAATACGAT CGCTTTCGGC CAATTTGCTC TCCAAGCTCA AGACTGTGGT TGGGTCACTG CTCGTCAAAT TGAAGCAAGT AGACGAGCAA TGACAAGATA TATTAAGCGT GGAGGTCAAA TCTGGATAAG AATATTTCCT GATAAACCTG TCACCATGAG ACCTGCTGAA ACTAGAATGG GTTCTGGTAA AGGTAATCCC GAGTTTTGGG TTGCAGTTGT AAAACCAGGG AGAATACTTT TTGAAATGGG TGGAGATGAT ATTACAGAGG AAATTGCAAA AGAAGCTATG CGTCTAGCTC AATACAAACT TCCTGTAAAG ACAAAATTTA TCTCGAGTGA TAAAAATCTA GAAGTTTCTT CTCAAGAAAA CACAAAAAAT AATAAAGAAT CTCAAGAGGA GGTTAAACAG TGA
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Protein sequence | MLSPKRTKFR KQHRGRMRGV ASKGNTIAFG QFALQAQDCG WVTARQIEAS RRAMTRYIKR GGQIWIRIFP DKPVTMRPAE TRMGSGKGNP EFWVAVVKPG RILFEMGGDD ITEEIAKEAM RLAQYKLPVK TKFISSDKNL EVSSQENTKN NKESQEEVKQ
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