Gene PMT9312_1607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1607 
Symbol 
ID3766425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand+ 
Start bp1507488 
End bp1508162 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content27% 
IMG OID637798145 
Productsite-specific recombinase 
Protein accessionYP_398103 
Protein GI78779991 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.138506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTTTTT ATTTATTTAT TGATACACTA AAAAATATAT GTAAGAAAAC ATTGACTTTT 
AAATTCAAAA GAAAACGTCT TTTACTATCT AAAAAAAATA AAAACTATAA AGCTATAGGA 
TATGCTAGAG CTATTCATAA TGAATTTGAA TATTTAGAGG AGCAAATAAA AAATTTAAAG 
GAAAAAGGTT GCAGTGAAGT ATTCTCTGAA TTTGTAAGTT TAGATGAAGA AATCAAACCC 
CAACTAAATA AAGCTATAAA TTGCTTATCT AAAGGAGATG AATTAATAAT AACTAAGCTT 
GATCGAGCAT TTAAAAATAA AAAAGAATGT TTGATGACAA TAAATAAACT CATTAATCAG 
GATATTAAAT TGCGAACTCT GACTGGATTT TTTGCGGATT ATGATTCCTC TAAAACAAAT 
TCTTCAATTT TTAAGATTTT ATATGAATTG GATAATTTAG AAGACAAAAG TTTAGGGGAA 
AGAAAAAAAG AACAACTATT ACGTAGAAAA TTATCCGGGA ATAATCTAGG AGGAAGGCCA 
AAGATCAGTC CTTTAAAAGA ATCTCTAGTA ATCAGATTAC GTAATGAAGG ATATTCATAT 
CGATCAATAA GAGCACAAAC AGGAATTGCA TTGTCAACAA TTAGGAGAGT AATTTTGGAA 
GGAGAATTAA ACTAA
 
Protein sequence
MFFYLFIDTL KNICKKTLTF KFKRKRLLLS KKNKNYKAIG YARAIHNEFE YLEEQIKNLK 
EKGCSEVFSE FVSLDEEIKP QLNKAINCLS KGDELIITKL DRAFKNKKEC LMTINKLINQ 
DIKLRTLTGF FADYDSSKTN SSIFKILYEL DNLEDKSLGE RKKEQLLRRK LSGNNLGGRP 
KISPLKESLV IRLRNEGYSY RSIRAQTGIA LSTIRRVILE GELN