| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1577 |
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| Symbol | |
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| ID | 3766394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 1470199 |
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| End bp | 1472103 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637798114 |
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| Product | DNA-directed RNA polymerase subunit gamma |
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| Protein accession | YP_398073 |
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| Protein GI | 78779961 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02387] DNA-directed RNA polymerase, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAACA GCAACTTAAG AACTGAAAAT CACTTTGATT ACGTCAAAAT TTCAATAGCT
TCTCCACAAA GAATAATGGA TTGGGGACAG AGGACATTAC CCAATGGACA AGTGGTGGGG
GAAGTTACAA AACCTGAAAC TATTAATTAC AGGACTCTTA AACCAGAAAT GGATGGATTG
TTTTGTGAAA AGATATTTGG GCCTTCTAAA GATTGGGAAT GTCATTGTGG TAAATATAAA
AGAGTTAGAC ATAGAGGGAT TGTTTGTGAA AGGTGTGGGG TTGAAGTAAC TGAAAGTAGA
GTAAGAAGAC ATAGGATGGG CTATATAAAA CTTGCTGCTC CAGTTTCCCA TGTTTGGTAT
TTGAAGGGAA TTCCTAGTTA CGTTGCTATC CTTTTGGATA TTCCACTAAG AGATGTAGAA
CAAATAGTTT ATTTTAATTG TTATGTTGTT TTAGACCCGG GTGATCATAA AGAACTCAAA
TATAAGCAAT TACTCACTGA AGATGAATGG TTGGAAATTG AAGATGAAAT CTATGCTGAA
GATTCAACTA TTGAGAATGA GCCTTTTGTT GGTATTGGTG CCGAGGCCCT TAAGCAGTTA
CTTGAAGACC TTGATCTAAA TCAGATTGCC GAGGAGCTGA GAGAAGAAAT TACACAAAGT
AAGGGACAGA AAAGGGCAAA ACTTATTAAA AGGATAAGAG TTATTGATAA TTTCATTGCA
ACTAATGCAA AACCAGAATG GATGGTCCTA GATGCAATTC CAGTGATACC TCCAGATCTT
AGACCTATGG TCCAGCTTGA TGGGGGAAGA TTCGCAACTT CTGATTTAAA CGATCTTTAC
AGAAGAGTTA TAAATAGAAA TAATAGATTA GCTAGGCTAC AAGAAATTTT AGCTCCTGAA
ATTATCGTAA GAAATGAAAA AAGAATGCTT CAAGAGGCAG TTGATGCTCT TATAGATAAT
GGAAGGAGGG GAAGGACTGT TGTTGGAGCA AACAATAGAG CTCTTAAGTC CCTTAGTGAC
ATCATTGAAG GAAAACAAGG AAGATTTAGA CAGAATCTTC TCGGTAAGCG TGTTGACTAT
TCAGGAAGAT CTGTAATAGT TGTGGGCCCT AAATTAAAAA TGCATCAGTG TGGTCTTCCA
AAGGAAATGG CGATTGAGCT CTTCCAACCT TTTGTAATTC ATAGATTAAT TCGCCAGAAT
ATTGTGAATA ATATTAAAGC TGCAAAAAAA TTAATACAAA AAGCTGATGA TGAAGTTATG
CAAGTACTTC AGGAAGTAAT TGAAGGCCAC CCAATTCTTT TAAATAGAGC GCCTACTCTT
CATAGGTTAG GAATTCAAGC TTTCGAACCA AAATTAGTTG GAGGTAGAGC AATTCAACTT
CATCCTTTAG TTTGTCCTGC ATTTAATGCT GACTTTGATG GTGATCAAAT GGCAGTTCAT
GTTCCTTTAG CTTTAGAGTC ACAAACTGAA GCACGCATGC TGATGTTGGC TAGTAATAAC
ATTCTCTCTC CTGCTACTGG GGAACCAATT GTTACTCCAT CACAGGATAT GGTTTTGGGA
TCTTATTATC TGACTGCTCT GCAACCTAAT TATCAAAAAC CTGATTTTGG AGATAATAAA
TCTACTTTTG CTTCACTAGA GGATGTTATT TTTGCGTTTG AAGATAAAAG ACTCAGCTTA
CATGAATGGG TATGGGTTAG ATTTAATGGA GAAGTTGAAG ATGAGGACGA AATGAGTAAA
CCACAAAAAA TTGAAGAGCT AGAAGATGGC TCAAGATTAG AAATGTGGAA GTTAAGAAGA
GACAGATTTG ACTCACAGAA TAATTTAATT AGTAGATTTG TTTTGACAAC TGTAGGGAGA
GTAGTTATGA ACTATACCAT CATTGATTCT GTATCTAAAA CGTAA
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| Protein sequence | MTNSNLRTEN HFDYVKISIA SPQRIMDWGQ RTLPNGQVVG EVTKPETINY RTLKPEMDGL
FCEKIFGPSK DWECHCGKYK RVRHRGIVCE RCGVEVTESR VRRHRMGYIK LAAPVSHVWY
LKGIPSYVAI LLDIPLRDVE QIVYFNCYVV LDPGDHKELK YKQLLTEDEW LEIEDEIYAE
DSTIENEPFV GIGAEALKQL LEDLDLNQIA EELREEITQS KGQKRAKLIK RIRVIDNFIA
TNAKPEWMVL DAIPVIPPDL RPMVQLDGGR FATSDLNDLY RRVINRNNRL ARLQEILAPE
IIVRNEKRML QEAVDALIDN GRRGRTVVGA NNRALKSLSD IIEGKQGRFR QNLLGKRVDY
SGRSVIVVGP KLKMHQCGLP KEMAIELFQP FVIHRLIRQN IVNNIKAAKK LIQKADDEVM
QVLQEVIEGH PILLNRAPTL HRLGIQAFEP KLVGGRAIQL HPLVCPAFNA DFDGDQMAVH
VPLALESQTE ARMLMLASNN ILSPATGEPI VTPSQDMVLG SYYLTALQPN YQKPDFGDNK
STFASLEDVI FAFEDKRLSL HEWVWVRFNG EVEDEDEMSK PQKIEELEDG SRLEMWKLRR
DRFDSQNNLI SRFVLTTVGR VVMNYTIIDS VSKT
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