Gene PMT9312_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1562 
Symbol 
ID3766379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand+ 
Start bp1456527 
End bp1457231 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content24% 
IMG OID637798099 
Producthypothetical protein 
Protein accessionYP_398058 
Protein GI78779946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.781895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAA TTATTACTCA ACATGGGTGG GGACTAAATC AACATTTCTG GGATGATTAT 
AAAATTGATT TTTTAAAAAA TAATTGGCAT TGGCAAGATA ATGAAAGAGG CTATTTTTCG 
AAAAATAATT ATCAAGCAAA ATGGATTAAA AGCGACTCTA AAAAACAAAT CAGAATGACT 
TTATGCCATT CATATGGTTT TCATTTAATG GAAAAAACCA TTTTAAAAGA AGCTACTCAT 
ATTGTTCTTA TCAATTCTTT TAATAATTTT CTTCCTATAA ATCATAAGAG AAGCTTTATT 
TTGAGGTCTC TAAAAAGAAT GGAAACTAAA ATCATAAAAA ATGCACCTAA GGATATGTTG 
AAAGAATTTA TACATAGATC ATTTATGCCA AATGATATAA ATAATAGTTT TAAAAATATC 
TTTTATAAAA GTTTAGAGAG TTTAAATAAA ACTCTTCTTT TAAATGATTT AAAACAACTT 
TACCTCAATA GAGATTTTCC AGTATTTTTA AAAAAAGATT GCAAAATTAT TTTTATAAAG 
TCAGAAAATG ATTTGATTCT TGACAACGAA TCAAATAATA ACTTTTTAGA TTTCTTCAAT 
AGGACACTTA TTAGGAAGCC AATTTTAATT AAATTAGCTC AACAAGGTCA TTGCTTGAAT 
AATTTAAATT TATACGAGAT CTTGCTTAAT ACATTTAATG ATTGA
 
Protein sequence
MKQIITQHGW GLNQHFWDDY KIDFLKNNWH WQDNERGYFS KNNYQAKWIK SDSKKQIRMT 
LCHSYGFHLM EKTILKEATH IVLINSFNNF LPINHKRSFI LRSLKRMETK IIKNAPKDML 
KEFIHRSFMP NDINNSFKNI FYKSLESLNK TLLLNDLKQL YLNRDFPVFL KKDCKIIFIK 
SENDLILDNE SNNNFLDFFN RTLIRKPILI KLAQQGHCLN NLNLYEILLN TFND