| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1531 |
|---|
| Symbol | |
|---|
| ID | 3766348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 1428012 |
|---|
| End bp | 1429472 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637798068 |
|---|
| Product | F0F1 ATP synthase subunit beta |
|---|
| Protein accession | YP_398027 |
|---|
| Protein GI | 78779915 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGCAA CTCCATCAAC TTCTTCACAA ACTAAAGGCG TAGTACGTCA GGTAATTGGC
CCAGTTCTAG ATGTAGAATT TCCAGCTGGT AAATTGCCCA AAATATTAAA TGCTTTAAGA
ATTGAAGCAA AAAATCCTGC TGGACAAGAA ATAGCGCTCA CTGCTGAGGT CCAACAGCTC
CTTGGTGATC ATAGAGTCAG GGCAGTGGCA ATGAGTGGCA CAGACGGCCT TGTAAGGGGT
ATGGAGGCAG TCGACACAGG TGCCCCAATA TCTGTACCGG TAGGAGAAGC AACCTTAGGA
AGAATATTTA ATGTTTTAGG AGAACCAGTA GATGAACAAG GTCCAGTAAA AACTAAAGAT
ACTGCGCCAA TTCATAGAGC TGCTCCAAAG TTAACTGACC TAGAAACTAA GCCAAAAGTG
TTTGAAACCG GAATTAAAGT TATCGACCTT TTAGCTCCTT ACAGACAAGG AGGAAAAGTC
GGATTATTTG GAGGCGCTGG TGTTGGGAAG ACTGTTCTTA TTCAAGAGTT AATAAATAAC
ATTGCAAAGG AACATGGTGG AGTTTCTGTT TTTGGCGGCG TAGGAGAAAG AACCAGAGAA
GGGAACGATT TATATGAAGA ATTTAAAGAA TCAGGGGTTA TCAATGCTGA TGATTTAACT
CAATCAAAAG TTGCCTTATG TTTTGGACAG ATGAATGAGC CACCTGGTGC AAGAATGAGA
GTAGGCTTAT CAGCACTTAC AATGGCCGAA CATTTTAGAG ATGTAAATAA ACAAGACGTT
CTACTTTTTG TTGATAACAT TTTTAGATTT GTTCAAGCTG GTTCTGAAGT ATCGGCTTTA
CTTGGAAGAA TGCCTTCAGC TGTTGGGTAC CAACCAACTC TTGGGACTGA TGTTGGTGAA
TTGCAAGAGA GGATTACATC TACATTAGAA GGCTCAATAA CATCTATTCA GGCTGTTTAT
GTACCTGCAG ATGATCTAAC TGATCCTGCT CCAGCAACAA CCTTTGCACA TTTAGACGCT
ACTACTGTGC TTGCAAGAGC TCTTGCAGCT AAGGGAATTT ATCCCGCAGT TGACCCATTA
GACTCAACAA GTACTATGCT TCAACCATCA GTTGTTGGCG ATGAGCATTA CAAAACAGCC
AGAGCGGTTC AATCAACTTT GCAAAGATAT AAAGAATTAC AAGACATTAT TGCAATTCTT
GGTTTGGATG AGCTTTCTGA AGAGGATAGA TTAACAGTTG ACAGGGCTAG AAAAATTGAA
AAATTCCTTT CCCAACCTTT CTTCGTAGCA GAAATATTTA CTGGGATGTC AGGTAAATAC
GTCAAATTAG AAGAAACCAT AGCTGGTTTC AACATGATTT TGTCAGGCGA ATTAGATGAT
TTACCAGAAC AGGCATTTTA CTTGGTTGGT AACATTGATG AAGTCAAAGC AAAGGCTGAA
AAACTAAAGT CAGAAAAATA A
|
|---|
| Protein sequence | MVATPSTSSQ TKGVVRQVIG PVLDVEFPAG KLPKILNALR IEAKNPAGQE IALTAEVQQL
LGDHRVRAVA MSGTDGLVRG MEAVDTGAPI SVPVGEATLG RIFNVLGEPV DEQGPVKTKD
TAPIHRAAPK LTDLETKPKV FETGIKVIDL LAPYRQGGKV GLFGGAGVGK TVLIQELINN
IAKEHGGVSV FGGVGERTRE GNDLYEEFKE SGVINADDLT QSKVALCFGQ MNEPPGARMR
VGLSALTMAE HFRDVNKQDV LLFVDNIFRF VQAGSEVSAL LGRMPSAVGY QPTLGTDVGE
LQERITSTLE GSITSIQAVY VPADDLTDPA PATTFAHLDA TTVLARALAA KGIYPAVDPL
DSTSTMLQPS VVGDEHYKTA RAVQSTLQRY KELQDIIAIL GLDELSEEDR LTVDRARKIE
KFLSQPFFVA EIFTGMSGKY VKLEETIAGF NMILSGELDD LPEQAFYLVG NIDEVKAKAE
KLKSEK
|
|---|
| |