Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1454 |
Symbol | |
ID | 3766270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1365542 |
End bp | 1366333 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637797990 |
Product | RNA-binding S4 |
Protein accession | YP_397950 |
Protein GI | 78779838 |
COG category | [S] Function unknown |
COG ID | [COG2302] Uncharacterized conserved protein, contains S4-like domain |
TIGRFAM ID | [TIGR03069] photosystem II S4 domain protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGACT TAAAAGAAAT CTTAATAAAC TCAAACTACA AAGAAGAAAC TGAGGAATTA ATAAATATTG CTAACTTAGC TTACAAACAC TGGGAAACTT ATTGGACTGG ATTTAACTCA ACTTATGTTT GCGAGGAGAT TTCAAAAGAT TTTGAAAATT TAAATGATTT CAAATTTTTT GTTTATGGAG GATTCTCTTC CTCTCAAAGA TCAAGAATAG CTTGCTTTAG AGGAGATAAC ATTCCTGAAG AGGATGCACT AAAAAGTAAT TTTCCAGCTC AAGGGATAAA AATTAATGGC AATTTTTTAT TTGATAATGC TACACAAGAC GATTTTAGAT CCCTCTTAAT TGAAAATGGG GTACATAAAG TAAAAGTAGG CGATATATGG ACTATTGGAG ATAGGGGGGC ACAAGGAATA ATTGATAATT TAGATATTGA GCATCTAAAT GAAAAGATTT TTTATTTGAG AGACGTAAAA GTAAAAATTA ATTTAGTTGG TATAGATGAA TTACAAATAC CTTCTGGAAG AACAAAAAAA CTTGTTAATA CAGTAGAAGC TTCAACAAGA TTAGATGCTA TAGCTTCAGC AGGTTTTAGG ATATCACGAA CCAAAATCAT TGAAAGGATA GAAAATGGAA TGCTCAAATT AAATGGAAGC AAAGTTAACA AGCCAACTAT TAATCTAAAA ATTGGCGACA AACTAGAACT AGAAAATAAA GGATTTATCG AAATTCTAAA TTTAGAAATC ACCAAAAGAG AAAGATGGAA AGTTAAATTA CTTAGAAAAT GA
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Protein sequence | MIDLKEILIN SNYKEETEEL INIANLAYKH WETYWTGFNS TYVCEEISKD FENLNDFKFF VYGGFSSSQR SRIACFRGDN IPEEDALKSN FPAQGIKING NFLFDNATQD DFRSLLIENG VHKVKVGDIW TIGDRGAQGI IDNLDIEHLN EKIFYLRDVK VKINLVGIDE LQIPSGRTKK LVNTVEASTR LDAIASAGFR ISRTKIIERI ENGMLKLNGS KVNKPTINLK IGDKLELENK GFIEILNLEI TKRERWKVKL LRK
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