Gene PMT9312_1448 details

Gene Information

• Locus tag: PMT9312_1448
• ID: 3766264
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: +
• Start bp: 1360908
• End bp: 1361468
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637797984
• Product: pentapeptide repeat-containing protein
• Protein accession: YP_397944
• Protein GI: 78779832
• COG category: [S] Function unknown
• COG ID: [COG1357] Uncharacterized low-complexity proteins

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGATCG AAATGGTTTC TATTTTTTCA TCACTACATA AGTCTTTTAA AAGACTTTTA 
ATTTTTCTTC CATTGATTAT TGGTTTACTT CTTAATCCAA TTTCTACTAA TGCACTTTAT 
CCTAGTGATC CTTCATCAGT AGATGGATTG AAAGAAGATC TTCATGGTGC AGATCTTCAA 
AATAATGAAT TTGTAAAATA TGATTTATCT AATCAAGATT TAGGAGAGGC AAATCTACAA 
GGCGCCTATA TGAGCGTAAC AACTGCAGCA AATTCTAGTT TCAAAAGCGC GAACATGAAA 
GATCTTATTG CATATGCTGT ACGTTTTGAT AATGCTGATT TATCTGATGC AAATCTTACT 
AATGGTGAGC TGATGAAAAG TGTTTTTGAT GGGGCAACTA TAGATGGAGC AGACTTTACT 
GATGCAACTC TTGATCTTCC TCAGAGGAAA TCATTATGTG AAAGAGCAAC AGGTACTAAC 
TCAAAAACTG GAGTGGACAC AGTAGATAGT CTTGAATGTT CAGGCTTAAG AGGTTATATA 
CCTGCAACAC CAGAAGCTTA A 

 

Protein sequence

MLIEMVSIFS SLHKSFKRLL IFLPLIIGLL LNPISTNALY PSDPSSVDGL KEDLHGADLQ 
NNEFVKYDLS NQDLGEANLQ GAYMSVTTAA NSSFKSANMK DLIAYAVRFD NADLSDANLT 
NGELMKSVFD GATIDGADFT DATLDLPQRK SLCERATGTN SKTGVDTVDS LECSGLRGYI 
PATPEA