| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1426 |
|---|
| Symbol | |
|---|
| ID | 3766242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 1339129 |
|---|
| End bp | 1339857 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637797962 |
|---|
| Product | orotidine-5'-phosphate decarboxylase |
|---|
| Protein accession | YP_397922 |
|---|
| Protein GI | 78779810 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA GATTTAATTC AGAAGATAAA ATAATATTGG CAATTGATGG ACTAGATCTA
AATCAAGCAA AATTACTTCT AGAAAAATGT CCTAGTATTA AGTGGGTGAA AGTTGGTTTA
GAGCTTTTTG TGAGGGAAGG CCCAAGAGTT GTTGAAATAT TAAAAGGTTT AAATAAAAAA
ATTTTTTTAG ACTTAAAATT TCATGATATT CCAAATACCA TGAGCGCAGC TTGTTTCCAA
GTGTCAAAAT TAGGGGTTGA TATAATTTCT GTACATTCTT CAGCAGGTCT TAAAGCTCTT
CAGGATTCAA AAAAAGCATC TTTAGAAGGA GCAAGTTTGG CCAATTTAAA ACCTCCTTTT
GTTGTAGGTA TAACTGTCTT AACAAGTTTT TCTCTTAAAG ATTTTCAAAC TGATCTTGAT
CGGAAAAATT CAATTGAAGA TAATGTATTG AGGCTTGCAA AGTTGTCTTT TGATGCAGAA
TTAGATGGAT GTGTTTGTTC CCCTTGGGAA GTAAAAATGT TGAGATCGAT TTATAAGAAC
AATTTTGAAC TAATAACACC TGGTATTAGA TTAAAGATTG ATAATAAAGA TGATCAAAAT
AGAATTATGA CTCCTAATGA AGCCATAGAT AATGGTGCTT CTAAATTGGT CATTGGTAGA
TCAATATCAA AAGCTTTAGA CCCTAATAAA GCTCTGATAG AGATTTTTAA ATCTATTGAT
TCTGATTAA
|
|---|
| Protein sequence | MKNRFNSEDK IILAIDGLDL NQAKLLLEKC PSIKWVKVGL ELFVREGPRV VEILKGLNKK
IFLDLKFHDI PNTMSAACFQ VSKLGVDIIS VHSSAGLKAL QDSKKASLEG ASLANLKPPF
VVGITVLTSF SLKDFQTDLD RKNSIEDNVL RLAKLSFDAE LDGCVCSPWE VKMLRSIYKN
NFELITPGIR LKIDNKDDQN RIMTPNEAID NGASKLVIGR SISKALDPNK ALIEIFKSID
SD
|
|---|
| |