Gene PMT9312_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1422 
Symbol 
ID3766238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1336336 
End bp1337091 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content35% 
IMG OID637797958 
Productputative transporter, membrane component 
Protein accessionYP_397918 
Protein GI78779806 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTACC CTAAGTTTTT CAAAAGACTT CTAAGCAGCA TAATGATTGG CGGGCAAGCA 
ATTAATTTTA TCTTTAGAGG TAAAATTTCC AAAAATGATC TTTTTGAACA ACTAATGGAA
TCAGGGCCTG GAAGTTTGTT AATTGTATTA ATTACAGGAA TAGCAGCAGG GACAGTCTTT
AATATTCAAG TTGCATCACA ATTGACAAGC ATGGGGGTAT CAAGTGAAAT AGGAGGTTTA
TTAGCAGTAG GAATGGCTAG AGAAATGGCT CCTCTTCTAA CTGCTACTTT AATGACTGGG
AAAGTTGCCA CCGCTTATGC TGCTCAACTG GGCACTATGA AAGTTACAGA ACAAATTGAT
GCTATAACAA TGTTAAGAAC TGAACCAATC CAATATTTGG TGGTTCCAAG GTTACTATCG
ATGGTAATAA TGTCTCCAAT ACAGTGTCTT TTGTTTTTAT CTGTAGCTTT ATGGAGTGGA
CAAATTTGGA GCACAATTTT TTATAAAGTT CCTCCAATAG TTTTCTGGAC ATCTGTAAGA
TCAGGTAATG TAAGTTTAAC CAGTACAGAC TTAACTTCAA TGTTAATAAA ATCTGTAGTG
TTCGGATTAA TTATTTCAAT TATTGCCTGT GGATATGGAC TCACTACTAA AGGTGGTCCA
AAAGAAGTTG GGACAAGTAC AACAGGCGCT GTTGTAATGA CTCTCGTTAC TGTATCTTTA
ATGGATGTAT TATTAACACA AATATTATTT GGATGA
 
Protein sequence
MYYPKFFKRL LSSIMIGGQA INFIFRGKIS KNDLFEQLME SGPGSLLIVL ITGIAAGTVF 
NIQVASQLTS MGVSSEIGGL LAVGMAREMA PLLTATLMTG KVATAYAAQL GTMKVTEQID
AITMLRTEPI QYLVVPRLLS MVIMSPIQCL LFLSVALWSG QIWSTIFYKV PPIVFWTSVR
SGNVSLTSTD LTSMLIKSVV FGLIISIIAC GYGLTTKGGP KEVGTSTTGA VVMTLVTVSL
MDVLLTQILF G