Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1395 |
Symbol | |
ID | 3766207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1309418 |
End bp | 1310131 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637797928 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_397891 |
Protein GI | 78779779 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTGAAGT CTGGAAAAAC TCCCTCCAAA ATTTTAGTTA CCGAAAAATG GCTAAGAAAG AATGAAAATC TAAGCAAAAA GCTTCAACCG TCATTAATAA ATATTGTCTC AGAGGAAGTC TTAGCATCTG CGATTTCAAC GATTAATCCA GATGGGATAG CAGCTTTGGT AGAGATTTCA TCAATACCTA ATTATCAATT TAATATTAAA GATGATTTTG TTCTTGTTCT CGAAAGGATT CAAGATCCTG GGAATATGGG TAGTCTTTTC AGAACTGCTC TAGCTGCTGG CGTTGATGCA ATTCTTTTAG CTGGAGGTGC CCATCCATTA AGCCAAAAGG TATTAAGGGC ATCTTCTGGC GCAGTTTTTC ATCTGCCATT TTTAAGATTT GATGGAACTG AAGAAGAAAT ATTAAATTCT TTATGCAAGT CTTTGTATGA ATTATCAAAT GTAGGATTTA AGATTTTTAC TACTAGTAGC CATAATAAAA GTTCAAAAAA ATCTTCAAAA CCCTACTGGG AAATTGATTG GACTAAGTCT ACTGCCTTGA TTTTGGGTAA TGAGGGTCAA GGTATTCATA AAAAAATTCA AGAAGCTTTT AATGAAACAA TTACAATTCC GCATAGTGAG CTTGTAGAAT CATTAAATGT GGCTTGCGTT GCAGTTCCAT TATTACTAGA ACGAAAAAGA GTCGCATACA CCTCTAATAC GTAG
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Protein sequence | MLKSGKTPSK ILVTEKWLRK NENLSKKLQP SLINIVSEEV LASAISTINP DGIAALVEIS SIPNYQFNIK DDFVLVLERI QDPGNMGSLF RTALAAGVDA ILLAGGAHPL SQKVLRASSG AVFHLPFLRF DGTEEEILNS LCKSLYELSN VGFKIFTTSS HNKSSKKSSK PYWEIDWTKS TALILGNEGQ GIHKKIQEAF NETITIPHSE LVESLNVACV AVPLLLERKR VAYTSNT
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