Gene PMT9312_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1395 
Symbol 
ID3766207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1309418 
End bp1310131 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content35% 
IMG OID637797928 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_397891 
Protein GI78779779 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTGAAGT CTGGAAAAAC TCCCTCCAAA ATTTTAGTTA CCGAAAAATG GCTAAGAAAG 
AATGAAAATC TAAGCAAAAA GCTTCAACCG TCATTAATAA ATATTGTCTC AGAGGAAGTC
TTAGCATCTG CGATTTCAAC GATTAATCCA GATGGGATAG CAGCTTTGGT AGAGATTTCA
TCAATACCTA ATTATCAATT TAATATTAAA GATGATTTTG TTCTTGTTCT CGAAAGGATT
CAAGATCCTG GGAATATGGG TAGTCTTTTC AGAACTGCTC TAGCTGCTGG CGTTGATGCA
ATTCTTTTAG CTGGAGGTGC CCATCCATTA AGCCAAAAGG TATTAAGGGC ATCTTCTGGC
GCAGTTTTTC ATCTGCCATT TTTAAGATTT GATGGAACTG AAGAAGAAAT ATTAAATTCT
TTATGCAAGT CTTTGTATGA ATTATCAAAT GTAGGATTTA AGATTTTTAC TACTAGTAGC
CATAATAAAA GTTCAAAAAA ATCTTCAAAA CCCTACTGGG AAATTGATTG GACTAAGTCT
ACTGCCTTGA TTTTGGGTAA TGAGGGTCAA GGTATTCATA AAAAAATTCA AGAAGCTTTT
AATGAAACAA TTACAATTCC GCATAGTGAG CTTGTAGAAT CATTAAATGT GGCTTGCGTT
GCAGTTCCAT TATTACTAGA ACGAAAAAGA GTCGCATACA CCTCTAATAC GTAG
 
Protein sequence
MLKSGKTPSK ILVTEKWLRK NENLSKKLQP SLINIVSEEV LASAISTINP DGIAALVEIS 
SIPNYQFNIK DDFVLVLERI QDPGNMGSLF RTALAAGVDA ILLAGGAHPL SQKVLRASSG
AVFHLPFLRF DGTEEEILNS LCKSLYELSN VGFKIFTTSS HNKSSKKSSK PYWEIDWTKS
TALILGNEGQ GIHKKIQEAF NETITIPHSE LVESLNVACV AVPLLLERKR VAYTSNT