Gene PMT9312_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1379 
Symbol 
ID3766191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1292395 
End bp1293132 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content38% 
IMG OID637797912 
Productintegral membrane protein, interacts with FtsH 
Protein accessionYP_397875 
Protein GI78779763 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCAA GTAGTAATTT TAATCAAGCT ATTCGTGAAG CACAAACTAG TTCAATTGTT 
GGACCTAATG TTGTTCAAAA AGCTCTACCA TATGTTGGTG GAGGTATGGT TCTAACTTCT
TTAGGCGTTT TAGCAGGTGT TTCACTCATA GCAACAAATC CTGGACTTTT CCAGCCTCTC
TCAATAGTTG CTTTAATTGC AGAATTGATT TTGTTTTTTA TAGCAACAAG CGCTGCGAAT
AATGCAAATA ACGCAAAGGC CTTGCCTTTA CTTACAGGCT TTAGTTTACT AACCGGATTC
ACCTTAAGCG GAATAGTTGC TTTAGCAATA GGAACAATAG GTATCGGTTC AGTTGGGACT
GCAGCATTAG CTACGGGTAT AACTTTTGTG ATTGCCTCAT ACACTGGCCA AAGAATGAGC
GATAGTGTTG GTCAAGCATT AAGTGGAGTT GTTGGCCTCG GTCTAATAGG TCTGCTCATA
GCAATGTTTT TCCAATTAAT TGGAGGATTC TTTGCTCCAA GTGTTTTTGG AGGCTCAGGA
CTTGAATTGA TAATTGCAGG ATTTGGAACT GTCTTATTTG TTGCAATGTC TTTTGTAGAT
TTCTATACAA TGCCAAGAAG ATATAATGAT GATCAATACC TGGCAGGGGC TTTAGGTATG
TATCTAACTT ATATAAACCT TTTCGTCTTT ATATTGAGAT TAATGATTGC ACTTCAAGGC
GGAGGAAGAA GAGACTAA
 
Protein sequence
MPASSNFNQA IREAQTSSIV GPNVVQKALP YVGGGMVLTS LGVLAGVSLI ATNPGLFQPL 
SIVALIAELI LFFIATSAAN NANNAKALPL LTGFSLLTGF TLSGIVALAI GTIGIGSVGT
AALATGITFV IASYTGQRMS DSVGQALSGV VGLGLIGLLI AMFFQLIGGF FAPSVFGGSG
LELIIAGFGT VLFVAMSFVD FYTMPRRYND DQYLAGALGM YLTYINLFVF ILRLMIALQG
GGRRD