Gene PMT9312_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1315 
Symbol 
ID3766124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1226341 
End bp1227339 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content31% 
IMG OID637797845 
ProductNAD dependent epimerase/dehydratase 
Protein accessionYP_397810 
Protein GI78779698 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAAAAA ATCTTCTATT AAACTCAAAA GTATTTATTG CAGGCCATAA AGGAATGGTA 
GGTAGTGCAA TATTTAGGAA GTTAGATAAT TTAGGTTACA AGAATATAAT TACAGTCACA
AAAAAAGACT TAAATCTAGA GGATGCAAAT AAAGTAAGAC AGTGGTTTGA AAACTACAAA
CCAGATATTG TGATAATCGC AGCCGCAAAA GTTGGTGGAA TAAATGCAAA TAATAAATAT
CCTGTTGACT TTTTACTAAA GAACTTAAAA ATTCAAAATA ACTTAATAGA GGCTTCTTGG
TTAAATAATG TCAATAGATT ACTTTTTCTT GGTAGTAGTT GTATTTATCC AAAATTTTCA
ACCCAACCAA TTAAAGAAGA ATATTTATTA ACGGGAGAAT TAGAACCCAC AAATGAATGG
TACGCGCTAG CAAAAATTGC AGGTATAAAA TTATGTCAGG CGCTTAGGAA GCAATACGGA
TTTGATGCAA TAAGTTTAAT GCCTACAAAT TTATATGGTC CAGGCGATAA TTATAATTTA
TCTTCTTCTC ATGTTTTGCC TGCCTTAATA AGAAAATTTT ATGAAGGGAA AGAAAATAAT
TTAAATGAAG TAACATGTTG GGGTACTGGT AACCCTAGAA GAGAATTTTT ACATGTTGAT
GACTTAGCCG AAGCGGTTGT TTTTGTTCTG AAAAATTGGC ATCCTTCACT TCCAGAAGCC
CCAAAAGATT CTCGCAATCA AACACTCCCT TTTTTAAATG TTGGAACAGG GAATGATATT
TCTATAAAAG AATTAGCTAA TTTGATTGCA AAAGAAATAG GCTATTGTGG AAAAATTATC
TGGGACCAAT CAAAGCCAGA TGGAATGTTT AGGAAGCAAC TTGATGTTTC AAATATTATT
AATTTGGGTT GGGAACCTAA GATTAAATTT AGTGATGGTA TTAAAGATTC AATTATCGGT
TTTAAAAATG AACTTAAGAC AAATACTCTA AGAATATGA
 
Protein sequence
MQKNLLLNSK VFIAGHKGMV GSAIFRKLDN LGYKNIITVT KKDLNLEDAN KVRQWFENYK 
PDIVIIAAAK VGGINANNKY PVDFLLKNLK IQNNLIEASW LNNVNRLLFL GSSCIYPKFS
TQPIKEEYLL TGELEPTNEW YALAKIAGIK LCQALRKQYG FDAISLMPTN LYGPGDNYNL
SSSHVLPALI RKFYEGKENN LNEVTCWGTG NPRREFLHVD DLAEAVVFVL KNWHPSLPEA
PKDSRNQTLP FLNVGTGNDI SIKELANLIA KEIGYCGKII WDQSKPDGMF RKQLDVSNII
NLGWEPKIKF SDGIKDSIIG FKNELKTNTL RI